Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AL442163.3-201ENST00000554110 156 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1□□□□□ -2.25
SHANK1Q9Y566 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC005786.1-201ENST00000588553 154 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 5S_rRNA.11-201ENST00000618635 84 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AL162373.1-201ENST00000620433 407 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 MIR410-201ENST00000362222 80 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.27-201ENST00000362540 103 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 RNU4-42P-201ENST00000364738 142 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 RNU6-1026P-201ENST00000384465 108 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 MIR216A-201ENST00000385063 110 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 HSPE1P24-201ENST00000450782 238 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 SUMO1P2-201ENST00000452524 304 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC092989.1-201ENST00000481235 277 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.683-201ENST00000516508 93 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC008269.2-201ENST00000561915 1105 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC010900.2-201ENST00000604508 210 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC006435.5-201ENST00000624486 112 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SHANK1Q9Y566 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.39-201ENST00000362620 98 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 RNU6-23P-201ENST00000363283 107 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 RNU6-873P-201ENST00000363833 107 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 RNU6-280P-201ENST00000364145 104 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.428-201ENST00000384078 102 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 MIR513A1-201ENST00000385138 129 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.594-201ENST00000410373 140 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AC105029.1-201ENST00000520250 669 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AC022254.1-201ENST00000567857 235 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AC005034.5-201ENST00000604219 466 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 MZT1P2-201ENST00000604387 248 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 MIR3976-201ENST00000606807 139 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AL008636.1-201ENST00000625038 1018 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AL669831.3-213ENST00000636676 183 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
SHANK1Q9Y566 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
SHANK1Q9Y566 SNORD50.1-201ENST00000362987 71 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MIR193B-201ENST00000384907 83 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNA5SP504-201ENST00000410676 117 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNU7-57P-201ENST00000459540 60 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC107032.1-201ENST00000485945 480 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 FGF7P4-201ENST00000509595 295 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 FRG2DP-202ENST00000566967 323 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MIR5690-201ENST00000583739 73 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AL096840.1-201ENST00000603287 93 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC091812.1-201ENST00000432235 1948 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 SNORA16B-201ENST00000364674 135 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.415-201ENST00000384012 112 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNU6-968P-201ENST00000384076 107 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNU6-281P-201ENST00000384212 103 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MIR586-201ENST00000385035 97 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNU2-54P-201ENST00000410299 190 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 SNRPEP8-201ENST00000442866 260 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MTCO3P8-201ENST00000453691 755 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC093852.1-201ENST00000503587 266 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 RNU7-193P-201ENST00000516723 65 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 SNORA20.3-201ENST00000516880 132 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 SNORA44.1-201ENST00000517031 108 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AK6P2-201ENST00000549020 471 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MIR4801-201ENST00000582704 82 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 PISRT1.1-201ENST00000616930 107 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AC008133.2-201ENST00000624540 351 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SHANK1Q9Y566 AL161722.3-201ENST00000605789 2983 ntBASIC0.98□□□□□ -2.25
SHANK1Q9Y566 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU6-1059P-201ENST00000363752 98 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU4-9P-201ENST00000364951 139 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 MIR515-2-201ENST00000384883 83 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 MIR515-1-201ENST00000384884 83 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU6-955P-201ENST00000410497 104 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.646-201ENST00000410980 101 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 PCNPP5-201ENST00000452246 481 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AC087477.1-201ENST00000465747 340 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 MTND3P22-201ENST00000510932 243 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 SCARNA16.2-201ENST00000516520 172 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.718-201ENST00000517110 102 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AL138825.1-201ENST00000618587 192 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 U1.36-201ENST00000620684 176 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 CASC19-280ENST00000642102 1351 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.187-201ENST00000363918 113 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.294-201ENST00000364916 102 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.319-201ENST00000365138 92 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU6-975P-201ENST00000384296 105 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms