Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC097462.1-201ENST00000514125 324 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU7-175P-201ENST00000515915 61 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-917P-201ENST00000516294 104 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-506P-201ENST00000516553 94 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AL590705.4-201ENST00000532209 134 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.74□□□□□ -2.29
LRRC42Q9Y546 snoU13.31-201ENST00000607291 104 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AF250324.2-201ENST00000608299 610 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC103591.3-201ENST00000608684 209 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC091895.1-201ENST00000624494 256 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-222P-201ENST00000362438 107 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-199P-201ENST00000362954 107 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-1059P-201ENST00000363752 98 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-595P-201ENST00000363944 107 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-910P-201ENST00000390844 107 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU1-139P-201ENST00000391307 165 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 FGF7P8-201ENST00000402994 292 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-1148P-201ENST00000410992 104 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 CALM2P4-201ENST00000430810 426 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 AC010598.1-201ENST00000510378 103 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-1114P-201ENST00000516022 107 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNA5SP458-201ENST00000516188 119 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU6-864P-201ENST00000516256 108 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.683-201ENST00000516508 93 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNA5SP168-201ENST00000516642 112 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 AC109635.3-201ENST00000529536 185 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 7SK.7-201ENST00000603504 247 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 AC080078.2-201ENST00000603766 501 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 SNORA28-201ENST00000606769 126 ntBASIC0.73□□□□□ -2.29
LRRC42Q9Y546 RNU4-75P-201ENST00000364621 146 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.363-201ENST00000365529 113 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 RNU6-281P-201ENST00000384212 103 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 U8.16-201ENST00000391279 133 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 AL355796.1-201ENST00000406706 323 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 MTCO3P19-201ENST00000415864 321 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 MTND3P21-201ENST00000433774 331 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC42Q9Y546 OR9P1P-201ENST00000496431 281 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 RNU6-314P-201ENST00000516574 104 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 RNU6-273P-201ENST00000516937 96 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 AC024909.2-201ENST00000553035 286 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 MIR6715A-201ENST00000615929 79 ntBASIC0.72□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.194-201ENST00000363985 102 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 SNORA20B-201ENST00000384220 132 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.490-201ENST00000384413 102 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 RNU6-1001P-201ENST00000411265 100 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 USP9YP16-201ENST00000430287 407 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 USP9YP23-201ENST00000455085 407 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC091021.1-201ENST00000468051 388 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 COX6CP14-201ENST00000469580 174 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC018710.1-201ENST00000506509 158 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.71□□□□□ -2.3
LRRC42Q9Y546 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 RNU6-107P-201ENST00000516643 102 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 RNU6-1088P-201ENST00000516850 104 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 RNU7-172P-201ENST00000517125 64 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 RNU6-1314P-201ENST00000517139 104 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC093023.1-201ENST00000547375 507 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC090049.2-201ENST00000550377 109 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 MIR4273-201ENST00000582824 84 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC091178.2-201ENST00000584401 117 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC125232.2-201ENST00000592457 143 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 AC068700.1-201ENST00000565862 3754 ntBASIC0.71□□□□□ -2.3
LRRC42Q9Y546 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 RNU6-842P-201ENST00000384269 107 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.517-201ENST00000384551 106 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 SNORD12-201ENST00000391002 90 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 RNU6-373P-201ENST00000411247 98 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AC063976.4-201ENST00000421971 163 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 USMG5P1-201ENST00000425964 177 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 USP9YP30-201ENST00000430729 455 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 MTND1P17-201ENST00000448961 204 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AC245505.1-201ENST00000556398 224 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AC048344.4-201ENST00000619744 527 ntBASIC0.7□□□□□ -2.3
LRRC42Q9Y546 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.7□□□□□ -2.3
LRRC42Q9Y546 AC005592.1-201ENST00000566527 1640 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 SNORA1B-201ENST00000362535 133 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.106-201ENST00000363189 100 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 RNU4-24P-201ENST00000364565 139 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.265-201ENST00000364677 108 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 RNU6-1264P-201ENST00000383891 107 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.402-201ENST00000383972 102 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms