Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 RNY3P4-201ENST00000384428 101 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 SNORD78.2-201ENST00000391076 69 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 RNU2-7P-201ENST00000410794 178 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 MIR3618-201ENST00000580330 88 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 AC092447.9-201ENST00000603395 144 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.99□□□□□ -2.09
KDM3AQ9Y4C1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 RNA5SP190-201ENST00000365222 118 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 RNU1-115P-201ENST00000365329 160 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 SNORA17.3-201ENST00000391159 129 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AL627390.1-201ENST00000396055 340 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AC096644.2-201ENST00000429278 159 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 HMGN1P13-201ENST00000505795 138 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AK6P2-201ENST00000549020 471 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AL137100.2-201ENST00000555786 315 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AC022432.1-201ENST00000595739 310 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 AL080274.1-201ENST00000605565 220 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
KDM3AQ9Y4C1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 Y_RNA.509-201ENST00000384506 99 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 MRPS17P9-201ENST00000511924 393 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 RPS29P30-201ENST00000600975 111 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 AL357075.2-201ENST00000614906 189 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 AC091932.3-201ENST00000624223 323 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
KDM3AQ9Y4C1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-926P-201ENST00000384075 107 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC108667.1-201ENST00000428618 249 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 RNU1-142P-201ENST00000516682 145 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 GNAI2P1-201ENST00000541815 315 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 SUB1P4-201ENST00000566062 339 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AL050343.2-201ENST00000607338 280 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC006157.1-201ENST00000611750 366 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AL160413.1-201ENST00000622780 310 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 AC010615.1-201ENST00000594254 1764 ntBASIC1.96□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 RAB28P5-201ENST00000427490 651 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 SNORD13-201ENST00000459299 104 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 RNU6-408P-201ENST00000515910 100 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AC024995.1-201ENST00000523014 93 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 HSBP1P1-201ENST00000555205 166 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 MIR4713-201ENST00000582691 75 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AL359075.3-201ENST00000613288 217 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 AC006435.5-201ENST00000624486 112 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 MIR4272-201ENST00000635924 64 ntBASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 RPS20P15-201ENST00000412792 311 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AC009310.1-201ENST00000414414 451 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AC016909.1-201ENST00000415916 166 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AL160004.2-201ENST00000432935 350 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AC112492.4-201ENST00000456549 352 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AC010598.1-201ENST00000510378 103 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AL606534.2-204ENST00000635008 178 ntBASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.94□□□□□ -2.1
KDM3AQ9Y4C1 MIR369-201ENST00000362155 70 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms