Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AL353572.1-201ENST00000442490 417 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 PCMTD1P1-201ENST00000455560 355 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC082651.2-201ENST00000496833 166 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC103851.1-201ENST00000506833 274 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AF235103.2-201ENST00000525753 346 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 MRPS36P4-201ENST00000534436 298 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC018638.8-201ENST00000588755 281 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 AC122108.2-201ENST00000611946 526 ntBASIC0.65□□□□□ -2.31
CHTOPQ9Y3Y2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-596P-201ENST00000365395 98 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1013P-201ENST00000384180 107 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-790P-201ENST00000384479 105 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 MIR517A-201ENST00000385001 87 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.619-201ENST00000410951 90 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 Z82205.1-201ENST00000428456 297 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 MTND4LP16-201ENST00000440828 295 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 DAP3P1-201ENST00000441522 278 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC079354.2-201ENST00000453523 154 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 MTCO3P8-201ENST00000453691 755 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU7-94P-201ENST00000459576 63 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-329P-201ENST00000459618 107 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC007215.1-201ENST00000464893 276 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC087343.1-201ENST00000477341 475 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RPL23AP75-201ENST00000491601 451 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AF186996.7-201ENST00000492781 209 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC069439.1-201ENST00000494739 167 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 MTCO2P30-201ENST00000503662 364 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-358P-201ENST00000516564 75 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-566P-201ENST00000516790 107 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1088P-201ENST00000516850 104 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC004584.2-201ENST00000570407 410 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 POLR3GP2-201ENST00000588366 668 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC080078.3-201ENST00000605407 463 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC124303.1-201ENST00000605703 360 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC019193.3-201ENST00000609144 554 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC092794.1-201ENST00000612734 582 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 AC137590.2-201ENST00000619709 240 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.64□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-510P-201ENST00000391239 108 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RPL30P16-201ENST00000419341 429 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 MTND1P17-201ENST00000448961 204 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RNU7-90P-201ENST00000459216 62 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 ACA59.1-201ENST00000515966 143 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RNU4-49P-201ENST00000516080 140 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 RNA5SP454-201ENST00000517231 127 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 MTND4LP26-201ENST00000518144 282 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC090049.2-201ENST00000550377 109 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 MIR5696-201ENST00000578474 85 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC060780.3-201ENST00000589464 80 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 SNORA28-201ENST00000606769 126 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC093913.1-201ENST00000614178 329 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 U6atac.1-201ENST00000616025 117 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC009248.2-201ENST00000619826 254 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 AC091895.1-201ENST00000624494 256 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 SCARNA4-201ENST00000629045 128 ntBASIC0.63□□□□□ -2.31
CHTOPQ9Y3Y2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.72-201ENST00000362894 103 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD115-32-201ENST00000364079 82 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 RNU4-9P-201ENST00000364951 139 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-53P-201ENST00000365367 106 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1186P-201ENST00000410429 97 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AL603825.1-201ENST00000438481 80 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.638-201ENST00000459374 113 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 MTND5P5-201ENST00000503764 376 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AC025647.1-201ENST00000517879 253 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms