Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC011195.1-201ENST00000578177 177 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC087683.1-201ENST00000591187 441 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AF246928.1-201ENST00000623768 87 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-833P-201ENST00000363486 107 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 RNY3P9-201ENST00000384727 106 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 RPS20P10-201ENST00000451209 253 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 TPTE2P5-203ENST00000458118 728 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO1P29-201ENST00000496868 288 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 AC009094.1-201ENST00000564443 426 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 MIR5692C1-201ENST00000585309 91 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 AC005014.3-201ENST00000605985 190 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 AC068137.4-201ENST00000638485 296 ntBASIC0.22□□□□□ -2.37
HDGFL3Q9Y3E1 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 SNORD50.1-201ENST00000362987 71 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-873P-201ENST00000363833 107 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.267-201ENST00000364679 109 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC079354.2-201ENST00000453523 154 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 MTND2P39-201ENST00000457230 764 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC091179.3-201ENST00000474761 144 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-759P-201ENST00000516740 103 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 RPL21P9-201ENST00000556149 474 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 MIR3913-1-201ENST00000577744 102 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC245884.10-201ENST00000597355 337 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AL357078.3-201ENST00000607528 618 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC007742.2-201ENST00000618226 398 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AC072046.2-201ENST00000618366 268 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 AL158209.2-201ENST00000619266 216 ntBASIC0.21□□□□□ -2.38
HDGFL3Q9Y3E1 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-727P-201ENST00000363592 107 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.319-201ENST00000365138 92 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 RNU5A-2P-201ENST00000384337 116 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 RNY3P10-201ENST00000384764 102 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 MIR891A-201ENST00000401237 79 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 RNA5SP222-201ENST00000411039 105 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 MTND2P18-201ENST00000419962 1030 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 MTCO2P16-201ENST00000436962 677 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 Z98949.2-201ENST00000440996 144 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 AC067940.1-201ENST00000458411 300 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 AC036111.3-201ENST00000526389 112 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 AC100830.2-201ENST00000581636 240 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 AC010620.1-201ENST00000601088 1102 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-94P-201ENST00000607728 107 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 AL008636.1-201ENST00000625038 1018 ntBASIC0.2□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.201-201ENST00000364052 96 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNU4-9P-201ENST00000364951 139 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNY1P8-201ENST00000383970 114 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-793P-201ENST00000384233 104 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1105P-201ENST00000384774 107 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 MIR32-201ENST00000384965 70 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 MIR216A-201ENST00000385063 110 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 SNORD111-201ENST00000408139 94 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AL358934.1-201ENST00000432346 324 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 Z82188.1-201ENST00000436709 154 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AC107401.1-201ENST00000503426 685 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RN7SKP164-201ENST00000516138 266 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1116P-201ENST00000517269 99 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AC104383.1-201ENST00000530297 370 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 MIR3915-201ENST00000578518 97 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AC092747.3-201ENST00000603769 301 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AL121757.2-201ENST00000611223 313 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AL158063.1-201ENST00000615349 536 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 AC100810.6-201ENST00000638068 285 ntBASIC0.19□□□□□ -2.38
HDGFL3Q9Y3E1 SNORA25.3-201ENST00000363205 127 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.184-201ENST00000363884 108 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-214P-201ENST00000384130 107 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-342P-201ENST00000384521 104 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 MIR153-2-201ENST00000385225 87 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 MIR140-201ENST00000385282 100 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 SNORD105-201ENST00000386910 85 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1158P-201ENST00000391167 107 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 MIR1827-201ENST00000408549 66 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNA5SP511-201ENST00000410487 115 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNU5A-5P-201ENST00000411054 116 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 MRPS10P2-201ENST00000431226 381 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AL031667.1-201ENST00000440222 725 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AC060788.1-201ENST00000521318 469 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AF235103.2-201ENST00000525753 346 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AL118558.2-201ENST00000556294 238 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AL133215.3-201ENST00000609801 448 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AL354950.2-201ENST00000617939 290 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 AC027279.3-201ENST00000625055 122 ntBASIC0.18□□□□□ -2.38
HDGFL3Q9Y3E1 RNU4-41P-201ENST00000364426 143 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 RNU5A-6P-201ENST00000384136 116 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms