Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SNORA75.4-201ENST00000391278 119 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 AL353997.1-201ENST00000432936 108 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 AC245517.4-201ENST00000448601 281 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 HMGN1P12-201ENST00000499125 195 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 CYCSP23-201ENST00000519781 313 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 AC015688.6-201ENST00000577737 104 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 AC005899.2-201ENST00000584353 90 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 U6.73-201ENST00000619194 103 ntBASIC1.12□□□□□ -2.23
TRAPPC4Q9Y296 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-1266P-201ENST00000362794 105 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-1145P-201ENST00000384246 107 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 Y_RNA.557-201ENST00000384680 107 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-331P-201ENST00000384724 107 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNA5SP109-201ENST00000391010 116 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNA5SP323-201ENST00000391094 133 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-876P-201ENST00000391295 104 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU4-14P-201ENST00000410858 122 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RBMX2P4-201ENST00000441256 376 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AL606517.2-201ENST00000442855 241 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RPS26P55-201ENST00000471178 356 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 SCARNA16.2-201ENST00000516520 172 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU1-142P-201ENST00000516682 145 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-307P-201ENST00000516743 106 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AL137100.2-201ENST00000555786 315 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 MIR4709-201ENST00000577272 72 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AC022217.4-201ENST00000604389 163 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 AC006435.5-201ENST00000624486 112 ntBASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAPPC4Q9Y296 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 SNORD81.2-201ENST00000365153 76 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-1264P-201ENST00000383891 107 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 RPL21P1-201ENST00000399532 476 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 ELOCP21-201ENST00000412558 336 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 COX6CP10-201ENST00000416832 224 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 Y_RNA.635-201ENST00000459041 101 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 SNORD65B-201ENST00000459126 73 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 MTND4P17-201ENST00000470444 350 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 RNU6-902P-201ENST00000517212 91 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 APOOP3-201ENST00000536787 586 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 AC004584.2-201ENST00000570407 410 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 AL357075.2-201ENST00000614906 189 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 PISRT1.1-201ENST00000616930 107 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 AL669831.3-213ENST00000636676 183 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 TPTEP1-208ENST00000636884 213 ntBASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAPPC4Q9Y296 MIR410-201ENST00000362222 80 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 RNA5SP361-201ENST00000362686 118 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 SNORD1A-201ENST00000364968 72 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 Y_RNA.595-201ENST00000410403 105 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC004965.1-201ENST00000413033 213 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC005002.2-201ENST00000438228 269 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC027119.1-201ENST00000440877 241 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 UBE2V1P7-201ENST00000446395 340 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 U8.22-201ENST00000459141 133 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 RPL17P19-201ENST00000489069 552 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC074133.1-201ENST00000515696 183 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 SNORA31.10-201ENST00000516482 106 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 RN7SKP49-201ENST00000516675 260 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 SNORA20.3-201ENST00000516880 132 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AL390123.1-201ENST00000603216 237 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC016727.1-205ENST00000605437 569 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC092794.2-201ENST00000620933 563 ntBASIC1.09□□□□□ -2.23
TRAPPC4Q9Y296 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.24
TRAPPC4Q9Y296 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 RNU6-318P-201ENST00000384283 103 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 Y_RNA.474-201ENST00000384341 102 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 RNU6-950P-201ENST00000384651 107 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 UQCRBP2-201ENST00000447827 297 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 MRPS10P1-201ENST00000448483 130 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 RNU7-87P-201ENST00000459343 62 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
TRAPPC4Q9Y296 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms