Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 RPL23AP42-201ENST00000471152 471 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 SNORA31.11-201ENST00000516528 139 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 RRN3P3-201ENST00000549207 578 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 AL109918.3-201ENST00000603072 338 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 MZT1P2-201ENST00000604387 248 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 BX284668.6-201ENST00000606899 438 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 MIR6845-201ENST00000613182 61 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 U2.14-201ENST00000615943 113 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 MIR6766-201ENST00000622641 72 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 MIR219B-201ENST00000637023 88 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 MTND5P35-201ENST00000557537 1720 ntBASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCAF8Q9UPN6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 SNORA25B-201ENST00000365507 128 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 RNU6-21P-201ENST00000384710 107 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 AC233702.2-202ENST00000562547 291 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 MIR5694-201ENST00000581190 76 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 MIR6895-201ENST00000613497 78 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 AC005562.2-201ENST00000618264 111 ntBASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCAF8Q9UPN6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 RNU1-23P-201ENST00000363361 144 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 RNY1-201ENST00000364228 113 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 RNU6-326P-201ENST00000365480 107 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 RNU6-793P-201ENST00000384233 104 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 AL033519.2-201ENST00000403958 392 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 AC091179.3-201ENST00000474761 144 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 AC130289.1-201ENST00000577321 73 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 MIR4643-201ENST00000577473 78 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 MIR4658-201ENST00000584344 65 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 AC005176.2-201ENST00000596933 147 ntBASIC2.59□□□□□ -1.99
SCAF8Q9UPN6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.59□□□□□ -2
SCAF8Q9UPN6 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 Y_RNA.569-201ENST00000384749 103 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.58□□□□□ -2
SCAF8Q9UPN6 SNORA53-201ENST00000391141 249 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 AL357139.1-201ENST00000407792 426 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 MIR548I3-201ENST00000408378 149 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 MIR548I1-201ENST00000408810 149 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 AL390729.2-201ENST00000416137 156 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.58□□□□□ -2
SCAF8Q9UPN6 MTND5P15-201ENST00000434246 349 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 RNU4-71P-201ENST00000516258 113 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 RNU2-31P-201ENST00000516954 155 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 AC018448.1-201ENST00000552843 316 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 AP000942.3-201ENST00000603702 160 ntBASIC2.58□□□□□ -2
SCAF8Q9UPN6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SCAF8Q9UPN6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.57□□□□□ -2
SCAF8Q9UPN6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
SCAF8Q9UPN6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.57□□□□□ -2
SCAF8Q9UPN6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
SCAF8Q9UPN6 RNU1-62P-201ENST00000362599 164 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 SNORA17.3-201ENST00000391159 129 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 SRIP3-201ENST00000413200 219 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 RNU6-625P-201ENST00000459412 107 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 AC018868.1-201ENST00000491307 315 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
SCAF8Q9UPN6 AC074133.1-201ENST00000515696 183 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 RNU6-344P-201ENST00000516635 111 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.57□□□□□ -2
SCAF8Q9UPN6 AC008749.1-201ENST00000597650 306 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.57□□□□□ -2
SCAF8Q9UPN6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCAF8Q9UPN6 Y_RNA.44-201ENST00000362676 108 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 RNU6-727P-201ENST00000363592 107 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 Y_RNA.274-201ENST00000364714 101 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 SNORA12-201ENST00000391162 147 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms