Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR1185-2-201ENST00000408687 86 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 RPS29P28-201ENST00000446439 141 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 AC107399.1-201ENST00000451226 265 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 MTND5P5-201ENST00000503764 376 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 AC011712.1-201ENST00000588959 234 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 AC010999.1-201ENST00000611856 324 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 AL359075.3-201ENST00000613288 217 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-700P-201ENST00000391043 107 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNA5SP504-201ENST00000410676 117 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 USP9YP16-201ENST00000430287 407 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 USP9YP23-201ENST00000455085 407 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-1114P-201ENST00000516022 107 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-358P-201ENST00000516564 75 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-307P-201ENST00000516743 106 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 MIR4709-201ENST00000577272 72 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 SNORA77B-201ENST00000578179 125 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 MIR4742-201ENST00000581069 85 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AC060780.3-201ENST00000589464 80 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AC022432.1-201ENST00000595739 310 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AC080078.2-201ENST00000603766 501 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 AC018462.2-201ENST00000605375 395 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 U6atac.1-201ENST00000616025 117 ntBASIC1.42□□□□□ -2.18
NPC1L1Q9UHC9 RNU4-38P-201ENST00000364472 129 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 MIR10B-201ENST00000385011 110 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 MIR513A1-201ENST00000385138 129 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 MIR548B-201ENST00000385247 97 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 RNU11-5P-201ENST00000391216 129 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 RNU1-139P-201ENST00000391307 165 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC073910.1-201ENST00000445047 438 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 UBE2V1P7-201ENST00000446395 340 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AP000870.1-201ENST00000472927 406 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC091179.3-201ENST00000474761 144 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC087343.1-201ENST00000477341 475 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 HMGN1P12-201ENST00000499125 195 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC046134.1-201ENST00000514454 666 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.683-201ENST00000516508 93 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 APOOP3-201ENST00000536787 586 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 UBL5P4-201ENST00000562584 236 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC005668.1-201ENST00000571142 476 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC090617.3-201ENST00000573670 475 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 AC005899.2-201ENST00000584353 90 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 SNORD114-21-201ENST00000606412 72 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 RNU6-727P-201ENST00000363592 107 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 SNORD87-201ENST00000364849 89 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 RNU6-842P-201ENST00000384269 107 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 MIR548K-201ENST00000408406 116 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 MTND3P23-201ENST00000431980 347 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 MTND1P4-201ENST00000435196 415 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 AC103851.1-201ENST00000506833 274 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 RN7SKP49-201ENST00000516675 260 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.708-201ENST00000516950 96 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 MIR5695-201ENST00000579717 85 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NPC1L1Q9UHC9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.2-201ENST00000362330 96 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.184-201ENST00000363884 108 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AC016909.1-201ENST00000415916 166 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 MTCYBP10-201ENST00000424905 650 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 FGF7P6-202ENST00000451282 293 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 RNA5SP436-201ENST00000516020 115 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AC019176.1-201ENST00000518519 225 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 MIR3684-201ENST00000579779 74 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AL355802.3-201ENST00000607571 545 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AC006435.5-201ENST00000624486 112 ntBASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
NPC1L1Q9UHC9 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RNU6-1059P-201ENST00000363752 98 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 Y_RNA.482-201ENST00000384377 111 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RNA5SP467-201ENST00000391274 118 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RNU6-1050P-201ENST00000410388 107 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RPL37P10-201ENST00000412884 288 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RPS3AP52-201ENST00000435639 297 ntBASIC1.38□□□□□ -2.19
NPC1L1Q9UHC9 RNU7-94P-201ENST00000459576 63 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms