Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR5696-201ENST00000578474 85 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR3923-201ENST00000579521 83 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR4273-201ENST00000582824 84 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.188-201ENST00000363952 111 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.577-201ENST00000384794 101 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 MIR215-201ENST00000384858 110 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 RNU2-38P-201ENST00000410856 79 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC099799.1-201ENST00000439809 192 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC010469.2-201ENST00000496412 480 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 RNU6-612P-201ENST00000516909 102 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC023157.2-201ENST00000540596 141 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC004584.2-201ENST00000570407 410 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC005899.2-201ENST00000584353 90 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AC125232.2-201ENST00000592457 143 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 PRR13P7-201ENST00000605538 430 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 MIR8062-201ENST00000621515 85 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 AL450472.1-202ENST00000637286 180 ntBASIC1.82□□□□□ -2.12
CLIP2Q9UDT6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.123-201ENST00000363338 102 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 RNU6-595P-201ENST00000363944 107 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.332-201ENST00000365271 113 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 SNORD14.1-201ENST00000365609 90 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.376-201ENST00000365638 108 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 RNU6-160P-201ENST00000384591 107 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 SNORA12-201ENST00000391162 147 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 MIR1252-201ENST00000408861 65 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 ACA59.1-201ENST00000515966 143 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 RNU6-567P-201ENST00000516746 107 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 RNU6-570P-201ENST00000517051 105 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AC021231.3-201ENST00000558497 370 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AC015720.1-201ENST00000565251 277 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 MIR3668-201ENST00000582138 75 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AL355297.3-201ENST00000604082 446 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 AC010900.2-201ENST00000604508 210 ntBASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CLIP2Q9UDT6 ZNF299P-201ENST00000406845 1804 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6-222P-201ENST00000362438 107 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.60-201ENST00000362831 98 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.424-201ENST00000384063 103 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RPL23AP36-201ENST00000413895 458 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AL445305.1-201ENST00000432577 575 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RPEP5-201ENST00000441137 268 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 HMGN2P18-201ENST00000450680 270 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6-1037P-201ENST00000459571 107 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RPL30P10-201ENST00000488148 337 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6-475P-201ENST00000516073 104 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6-1143P-201ENST00000516125 104 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNU6-897P-201ENST00000517135 105 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 RNA5SP490-201ENST00000517141 136 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AC005357.1-201ENST00000588399 301 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 AC062037.2-201ENST00000610137 73 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 PCGEM1.1-201ENST00000613431 131 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 MTND5P9-201ENST00000503854 1755 ntBASIC1.8□□□□□ -2.12
CLIP2Q9UDT6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.19-201ENST00000362462 99 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 U3.9-201ENST00000363823 204 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.358-201ENST00000365491 99 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.405-201ENST00000383979 100 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.451-201ENST00000384200 100 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNU6-933P-201ENST00000384424 107 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.524-201ENST00000384564 100 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.561-201ENST00000384694 100 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 MIR517C-201ENST00000385103 95 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 MT-TG-201ENST00000387429 68 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 SNORA48.1-201ENST00000390879 135 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.592-201ENST00000410274 109 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 LINC01399-202ENST00000458450 244 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNU7-95P-201ENST00000459222 64 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNU6-408P-201ENST00000515910 100 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNY3P15-201ENST00000516297 97 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 SNORA40.14-201ENST00000516543 86 ntBASIC1.79□□□□□ -2.12
CLIP2Q9UDT6 RNU6-794P-201ENST00000517261 64 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms