Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SNORD115-8-201ENST00000363856 82 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 SNORD115-38-201ENST00000365037 82 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 MIR520G-201ENST00000385064 90 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 MIR520H-201ENST00000385126 88 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AL049545.1-201ENST00000401856 572 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AL009048.1-201ENST00000450437 298 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 ELOCP24-201ENST00000456370 334 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 RPL23AP75-201ENST00000491601 451 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 SNORA25.14-201ENST00000516481 132 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AC069113.3-201ENST00000521019 150 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 MIR3612-201ENST00000579753 87 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AL022161.1-201ENST00000604390 213 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 AC010999.1-201ENST00000611856 324 ntBASIC-0.11□□□□□ -2.43
VPS29Q9UBQ0 SNORA42.1-201ENST00000363515 137 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 RNU6-727P-201ENST00000363592 107 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 RNU4-41P-201ENST00000364426 143 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 RNU6-815P-201ENST00000384080 113 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 RNU6-376P-201ENST00000384731 106 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 SNORA40.8-201ENST00000411034 126 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 PIGPP3-201ENST00000425307 415 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 Z98949.2-201ENST00000440996 144 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 MTND4P18-201ENST00000447010 465 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 PCNPP5-201ENST00000452246 481 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AC104576.1-201ENST00000524225 88 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 ELOCP32-201ENST00000548625 324 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 MIR4764-201ENST00000580680 88 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 MIR548AB-201ENST00000584917 84 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 MIR4768-201ENST00000585270 74 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 AC087683.2-201ENST00000611384 326 ntBASIC-0.12□□□□□ -2.43
VPS29Q9UBQ0 RNU6-784P-201ENST00000384330 106 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 RNU6-456P-201ENST00000384493 107 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 MIR513B-201ENST00000385136 84 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 SNORD83.1-201ENST00000411362 77 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 AP002963.1-201ENST00000530590 184 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 AC078938.1-201ENST00000620993 318 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.13□□□□□ -2.43
VPS29Q9UBQ0 MTND4P12-201ENST00000498999 1377 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 RNA5SP517-201ENST00000364724 117 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 RNY1P4-201ENST00000384595 115 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 MIR520F-201ENST00000384824 87 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 RNU6-903P-201ENST00000391270 109 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 RNA5SP95-201ENST00000410319 137 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 AC005534.2-201ENST00000431047 433 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 AL392103.1-201ENST00000447000 198 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 AC107401.1-201ENST00000503426 685 ntBASIC-0.14□□□□□ -2.43
VPS29Q9UBQ0 RNU6-369P-201ENST00000362515 102 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 RNA5SP214-201ENST00000363378 118 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 MIR516B2-201ENST00000385190 85 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 MIR1298-201ENST00000408783 112 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 SNORA14.1-201ENST00000516113 141 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 RNU7-43P-201ENST00000516554 64 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 MIR8076-201ENST00000611401 83 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 AL355073.2-201ENST00000612106 557 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 AC091925.1-201ENST00000623204 462 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 AC068137.4-201ENST00000638485 296 ntBASIC-0.15□□□□□ -2.43
VPS29Q9UBQ0 RNU6-873P-201ENST00000363833 107 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 MIR521-1-201ENST00000384902 87 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 MIR15B-201ENST00000385045 98 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 RNU6-679P-201ENST00000391003 106 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC243428.1-201ENST00000421099 264 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC091179.3-201ENST00000474761 144 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC091885.1-201ENST00000506658 268 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC114811.1-201ENST00000507207 168 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AL358944.1-201ENST00000528537 144 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 AC009161.2-201ENST00000624626 138 ntBASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
VPS29Q9UBQ0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms