Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC092423.1-201ENST00000430165 186 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AL162725.1-201ENST00000435405 301 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC233266.1-201ENST00000454518 96 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 RNU6-1291P-201ENST00000516591 104 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 RNU6-1116P-201ENST00000517269 99 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AP002004.2-201ENST00000531656 154 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC025627.3-201ENST00000582078 182 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC073648.5-201ENST00000603502 305 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC242852.1-201ENST00000612151 96 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AL158063.1-201ENST00000615349 536 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 AC244015.1-201ENST00000622301 99 ntBASIC0.42□□□□□ -2.34
VAPAQ9P0L0 Y_RNA.151-201ENST00000363566 112 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 Y_RNA.296-201ENST00000364930 108 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 RNU6-159P-201ENST00000391080 106 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.41□□□□□ -2.34
VAPAQ9P0L0 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 RPS3AP17-201ENST00000472594 777 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AP000870.1-201ENST00000472927 406 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC104383.1-201ENST00000530297 370 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC109810.1-201ENST00000534066 224 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC093913.1-201ENST00000614178 329 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
VAPAQ9P0L0 AC068137.4-201ENST00000638485 296 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
VAPAQ9P0L0 ELL2P3-201ENST00000457883 1602 ntBASIC0.41□□□□□ -2.34
VAPAQ9P0L0 MIR103A2-201ENST00000362154 78 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.4□□□□□ -2.35
VAPAQ9P0L0 RPL23AP50-201ENST00000434149 455 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.4□□□□□ -2.35
VAPAQ9P0L0 MTCO2P30-201ENST00000503662 364 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC091885.1-201ENST00000506658 268 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.4□□□□□ -2.35
VAPAQ9P0L0 MTATP6P24-201ENST00000576835 677 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC091178.2-201ENST00000584401 117 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AL512605.2-201ENST00000592972 256 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 AC007014.2-201ENST00000615581 479 ntBASIC0.4□□□□□ -2.35
VAPAQ9P0L0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.4-201ENST00000362333 112 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.167-201ENST00000363735 109 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 RNU5F-3P-201ENST00000363767 117 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 RNU6-407P-201ENST00000365280 104 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 SNORA20B-201ENST00000384220 132 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 RNU6-376P-201ENST00000384731 106 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 MIR891A-201ENST00000401237 79 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.39□□□□□ -2.35
VAPAQ9P0L0 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 MTND3P16-201ENST00000452205 344 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 PCMTD1P1-201ENST00000455560 355 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 RPL30P10-201ENST00000488148 337 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 7SK.7-201ENST00000603504 247 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 MIR8070-201ENST00000616510 88 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 SEPT14P17-201ENST00000617978 177 ntBASIC0.39□□□□□ -2.35
VAPAQ9P0L0 SNORA25.3-201ENST00000363205 127 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.336-201ENST00000365307 109 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 ZNF885P-201ENST00000420174 1098 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 MTCO1P20-201ENST00000425366 358 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC093019.1-201ENST00000443135 252 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.38□□□□□ -2.35
VAPAQ9P0L0 HMGN2P26-201ENST00000463169 339 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC083904.1-201ENST00000487828 231 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC018710.1-201ENST00000506509 158 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC093303.1-201ENST00000514549 295 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 PIGPP4-201ENST00000584447 307 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 POLR3GP2-201ENST00000588366 668 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
VAPAQ9P0L0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 SNORA69-201ENST00000383895 132 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNU1-119P-201ENST00000391122 165 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNU4-55P-201ENST00000410731 137 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 Z98949.2-201ENST00000440996 144 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNA5SP20-201ENST00000515976 84 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC011195.1-201ENST00000578177 177 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC087752.4-201ENST00000605911 462 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC010999.1-201ENST00000611856 324 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC073114.1-201ENST00000612027 490 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 MIR6504-201ENST00000613520 61 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AL008636.1-201ENST00000625038 1018 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 AC099654.12-201ENST00000639868 649 ntBASIC0.37□□□□□ -2.35
VAPAQ9P0L0 RNU6-833P-201ENST00000363486 107 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 RNU4-41P-201ENST00000364426 143 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms