Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MTND3P23-201ENST00000431980 347 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 AC074290.1-201ENST00000448883 135 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 RPS29P1-201ENST00000465274 159 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MTND5P5-201ENST00000503764 376 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 AC027419.1-201ENST00000522976 328 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MIR4742-201ENST00000581069 85 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 U6.108-201ENST00000637764 58 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1123P-201ENST00000362347 106 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 SNORD115-8-201ENST00000363856 82 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 SNORD115-38-201ENST00000365037 82 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.573-201ENST00000384763 105 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 RNU6-159P-201ENST00000391080 106 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AL356776.1-201ENST00000406574 447 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 MIR548F5-201ENST00000408421 86 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 MIR320B2-201ENST00000408479 138 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 MTND1P4-201ENST00000435196 415 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 HSPE1P13-201ENST00000451143 297 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 RNU6-329P-201ENST00000459618 107 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 RNA5SP54-201ENST00000516951 92 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 RNU1-54P-201ENST00000517181 120 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AL137100.2-201ENST00000555786 315 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AC018638.8-201ENST00000588755 281 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.13□□□□□ -2.23
TM9SF3Q9HD45 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 RNU6-595P-201ENST00000363944 107 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.466-201ENST00000384294 113 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 RNA5SP323-201ENST00000391094 133 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 MIR1277-201ENST00000408536 78 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1186P-201ENST00000410429 97 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 AL353997.1-201ENST00000432936 108 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 RPS27P1-201ENST00000450552 247 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 RNU6-221P-201ENST00000459541 99 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 AL590705.4-201ENST00000532209 134 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 AC068790.6-201ENST00000602558 258 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 AL929325.1-201ENST00000603096 117 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 ZNF299P-201ENST00000406845 1804 ntBASIC1.12□□□□□ -2.23
TM9SF3Q9HD45 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RNU6-874P-201ENST00000362390 105 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.106-201ENST00000363189 100 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RNU6-245P-201ENST00000384020 107 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1013P-201ENST00000384180 107 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RNA5SP118-201ENST00000410385 109 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RPS3AP52-201ENST00000435639 297 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 SNORD5.1-201ENST00000458800 75 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 RPL7P42-201ENST00000481005 679 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 HMGN1P12-201ENST00000499125 195 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AC026782.1-201ENST00000512952 449 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.670-201ENST00000516255 105 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AL442163.3-201ENST00000554110 156 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AC022217.4-201ENST00000604389 163 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 BX284668.6-201ENST00000606899 438 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AC002553.4-201ENST00000616896 331 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 AC139792.2-201ENST00000624218 587 ntBASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.2-201ENST00000362330 96 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.6-201ENST00000362350 114 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.179-201ENST00000363844 90 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNY1-201ENST00000364228 113 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1240P-201ENST00000365155 104 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU6-793P-201ENST00000384233 104 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.594-201ENST00000410373 140 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU6-1001P-201ENST00000411265 100 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RPS4XP11-201ENST00000446897 772 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU7-175P-201ENST00000515915 61 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 SNORA31.10-201ENST00000516482 106 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU6-107P-201ENST00000516643 102 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 RNU7-128P-201ENST00000517247 62 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AC134698.4-201ENST00000523451 826 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AC018462.2-201ENST00000605375 395 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AC005014.2-201ENST00000607795 599 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 AL357075.2-201ENST00000614906 189 ntBASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.184-201ENST00000363884 108 ntBASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TM9SF3Q9HD45 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms