Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-281P-201ENST00000384212 103 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA20B-201ENST00000384220 132 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MTND3P23-201ENST00000431980 347 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MTND1P29-201ENST00000448112 647 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 SUMO1P2-201ENST00000452524 304 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 AC091021.1-201ENST00000468051 388 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-107P-201ENST00000516643 102 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 AC027419.1-201ENST00000522976 328 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 AC090617.3-201ENST00000573670 475 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MIR4273-201ENST00000582824 84 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA1B-201ENST00000362535 133 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA27.1-201ENST00000362604 124 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORD114-2-201ENST00000363953 78 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-969P-201ENST00000383900 105 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORD116-1-201ENST00000384335 95 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AL355796.1-201ENST00000406706 323 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA11.2-201ENST00000408318 127 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC114482.1-201ENST00000418010 247 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC018865.2-201ENST00000423631 129 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AL591806.2-201ENST00000433122 173 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC018710.1-201ENST00000506509 158 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 SNORD111.1-201ENST00000516421 86 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC109635.3-201ENST00000529536 185 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC093023.1-201ENST00000547375 507 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 AC068790.6-201ENST00000602558 258 ntBASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SND1-IT1Q9HBX3 CASC19-280ENST00000642102 1351 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 MIR410-201ENST00000362222 80 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-306P-201ENST00000384617 107 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-376P-201ENST00000384731 106 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 MIR520G-201ENST00000385064 90 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-332P-201ENST00000391193 108 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 MIR1261-201ENST00000408659 82 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AP1B1P2-201ENST00000416196 106 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 UQCRBP2-201ENST00000447827 297 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AC245047.8-201ENST00000456455 284 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 LINC01399-202ENST00000458450 244 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU7-21P-201ENST00000459430 62 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNA5SP20-201ENST00000515976 84 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU7-12P-201ENST00000516030 62 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 ACA64.5-201ENST00000516207 127 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-864P-201ENST00000516256 108 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-947P-201ENST00000516264 106 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-197P-201ENST00000516680 100 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AC090142.3-201ENST00000519012 385 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AP002001.1-203ENST00000534002 267 ntBASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SND1-IT1Q9HBX3 MIRLET7C-201ENST00000362160 84 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 SNORD114-7-201ENST00000362520 77 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1013P-201ENST00000384180 107 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 MIR873-201ENST00000401120 77 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RPS3AP1-201ENST00000413190 320 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC009161.1-201ENST00000417306 376 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AL121890.1-201ENST00000435457 205 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AL137792.2-201ENST00000443484 235 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RNU7-90P-201ENST00000459216 62 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RPS26P48-201ENST00000491713 339 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC074133.1-201ENST00000515696 183 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 RNU1-54P-201ENST00000517181 120 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 MTND2P38-201ENST00000522536 667 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AL391903.3-201ENST00000612158 163 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC008163.1-202ENST00000636004 2889 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SND1-IT1Q9HBX3 AC005592.1-201ENST00000566527 1640 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 HSBP1P2-201ENST00000299671 229 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-222P-201ENST00000362438 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms