Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.47□□□□□ -2.17
RNF41Q9H4P4 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 AC025253.1-201ENST00000613623 543 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.263-201ENST00000364659 114 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNU6-417P-201ENST00000384712 107 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 MIR559-201ENST00000385188 96 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNA5SP467-201ENST00000391274 118 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RPL23AP36-201ENST00000413895 458 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC092423.1-201ENST00000430165 186 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC074290.1-201ENST00000448883 135 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RPS29P29-201ENST00000456396 171 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 RNU7-87P-201ENST00000459343 62 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC022493.2-201ENST00000506122 481 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC069114.2-201ENST00000604699 304 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AL359821.1-201ENST00000605519 182 ntBASIC1.46□□□□□ -2.18
RNF41Q9H4P4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.46□□□□□ -2.18
RNF41Q9H4P4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.46□□□□□ -2.18
RNF41Q9H4P4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 RNU6-1297P-201ENST00000384415 104 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 MTCYBP4-201ENST00000401524 249 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 RPL23AP50-201ENST00000434149 455 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 RNU7-152P-201ENST00000458982 64 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 RN7SKP49-201ENST00000516675 260 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 RNU7-128P-201ENST00000517247 62 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AP002001.1-203ENST00000534002 267 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AL355375.2-201ENST00000574825 175 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 MIR1302-1-201ENST00000637932 143 ntBASIC1.45□□□□□ -2.18
RNF41Q9H4P4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.45□□□□□ -2.18
RNF41Q9H4P4 AC245060.5-201ENST00000610778 3293 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 MIR520A-201ENST00000384862 85 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 RNY4P36-201ENST00000391116 96 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC008134.1-201ENST00000420943 193 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 HSPE1P9-201ENST00000440046 311 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 MTATP6P23-201ENST00000440153 476 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.44□□□□□ -2.18
RNF41Q9H4P4 RPL30P15-201ENST00000457129 321 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.653-201ENST00000459091 95 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 SNORD65B-201ENST00000459126 73 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.44□□□□□ -2.18
RNF41Q9H4P4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.44□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.702-201ENST00000516843 96 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC022868.1-201ENST00000517767 391 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 CYCSP23-201ENST00000519781 313 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC080078.3-201ENST00000605407 463 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC138305.3-201ENST00000624988 240 ntBASIC1.44□□□□□ -2.18
RNF41Q9H4P4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.44□□□□□ -2.18
RNF41Q9H4P4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RNF41Q9H4P4 MIR410-201ENST00000362222 80 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 RNU6-360P-201ENST00000390944 104 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AF228730.4-201ENST00000421457 183 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 PCNPP5-201ENST00000452246 481 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.43□□□□□ -2.18
RNF41Q9H4P4 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 MIR2053-201ENST00000459295 91 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AC105758.1-201ENST00000506038 399 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AC074133.1-201ENST00000515696 183 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.43□□□□□ -2.18
RNF41Q9H4P4 LARP7P1-201ENST00000605576 316 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 AC084781.2-201ENST00000615568 161 ntBASIC1.43□□□□□ -2.18
RNF41Q9H4P4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RNF41Q9H4P4 RNU6-879P-201ENST00000364328 108 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 RNU6-1009P-201ENST00000390996 107 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 RPS27P1-201ENST00000450552 247 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 RPL26P26-201ENST00000480251 434 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AL163195.1-201ENST00000496941 348 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 MIR2355-201ENST00000517199 87 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC093027.1-201ENST00000546698 429 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC018448.1-201ENST00000552843 316 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AP001094.1-201ENST00000579805 193 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 U6.73-201ENST00000619194 103 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms