Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIR183-201ENST00000384958 110 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR15B-201ENST00000385045 98 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AL355497.1-201ENST00000406262 551 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 CYCSP49-201ENST00000420810 319 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AC063976.4-201ENST00000421971 163 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS11Q9H270 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS11Q9H270 AC091153.1-201ENST00000466297 402 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 RPS29P2-201ENST00000479278 136 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 RN7SKP179-201ENST00000516126 217 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AC090049.2-201ENST00000550377 109 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS11Q9H270 MTND5P34-201ENST00000568888 325 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR3646-201ENST00000578301 84 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR3136-201ENST00000583498 78 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS11Q9H270 AC006254.2-201ENST00000603259 279 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AL391903.3-201ENST00000612158 163 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR3914-2-201ENST00000637339 95 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 U6.105-201ENST00000637379 88 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 AL161431.1-201ENST00000618966 4205 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS11Q9H270 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS11Q9H270 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS11Q9H270 RNU6-235P-201ENST00000362644 107 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RNU5F-3P-201ENST00000363767 117 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 SNORA25.7-201ENST00000364375 127 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RNU6-915P-201ENST00000364943 103 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 Y_RNA.309-201ENST00000365046 111 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 AL031003.1-201ENST00000404229 172 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RNA5SP475-201ENST00000410568 110 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 AC004866.1-201ENST00000411748 78 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS11Q9H270 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
VPS11Q9H270 AL121914.1-201ENST00000450188 156 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS11Q9H270 RNU5F-2P-201ENST00000516066 82 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 RNU6-168P-201ENST00000516189 101 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS11Q9H270 MIR5739-201ENST00000619803 80 ntBASIC2.96□□□□□ -1.94
VPS11Q9H270 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
VPS11Q9H270 Y_RNA.229-201ENST00000364347 113 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 RNU6-1264P-201ENST00000383891 107 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 MIR526A2-201ENST00000390198 65 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS11Q9H270 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS11Q9H270 AC104389.3-201ENST00000445629 235 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 AL357134.1-201ENST00000445848 426 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS11Q9H270 AC090525.1-201ENST00000479116 478 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS11Q9H270 RNU5E-3P-201ENST00000515913 68 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 RNU6-772P-201ENST00000516042 105 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 RNU6-844P-201ENST00000517175 102 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 AC109329.2-201ENST00000519658 482 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS11Q9H270 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS11Q9H270 MIR5680-201ENST00000577577 84 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS11Q9H270 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS11Q9H270 AC006380.1-201ENST00000603598 186 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 MIR6844-201ENST00000637122 62 ntBASIC2.95□□□□□ -1.94
VPS11Q9H270 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS11Q9H270 MIR208A-201ENST00000362287 71 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 RNU1-62P-201ENST00000362599 164 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 RNA5SP72-201ENST00000364442 117 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 Y_RNA.280-201ENST00000364765 112 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 Y_RNA.310-201ENST00000365063 113 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 Y_RNA.368-201ENST00000365547 113 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 AC003685.2-201ENST00000422795 395 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 HSPE1P13-201ENST00000451143 297 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 CYP2C59P-201ENST00000457790 269 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 SNORD33.1-201ENST00000516213 88 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS11Q9H270 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS11Q9H270 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS11Q9H270 MIR5582-201ENST00000579697 68 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 AC108081.1-201ENST00000604358 221 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 MIR7975-201ENST00000619350 68 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 SNORD98-201ENST00000636377 67 ntBASIC2.94□□□□□ -1.94
VPS11Q9H270 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS11Q9H270 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
VPS11Q9H270 RNA5SP387-201ENST00000364226 106 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 RNU6-1082P-201ENST00000364574 107 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 SNORD87-201ENST00000364849 89 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 Y_RNA.393-201ENST00000383936 102 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 MIR34B-201ENST00000385076 84 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 AL512604.1-201ENST00000404812 257 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 AL606845.1-201ENST00000404881 255 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 RNA5SP504-201ENST00000410676 117 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 Y_RNA.630-201ENST00000411370 108 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VPS11Q9H270 AC019205.3-201ENST00000424573 156 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 AC005326.1-201ENST00000429197 123 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms