Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC019176.2-201ENST00000611579 315 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.544-201ENST00000384650 113 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 MIR23B-201ENST00000384832 97 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 MIR670-201ENST00000390142 98 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 AL590004.2-201ENST00000404787 371 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-57P-201ENST00000411348 103 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 COX6CP6-201ENST00000490840 228 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 AC107934.2-201ENST00000518653 310 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 MIR4662B-201ENST00000579498 81 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 AC107294.3-201ENST00000609211 526 ntBASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.79□□□□□ -1.8
NUCKS1Q9H1E3 AC010680.1-201ENST00000590024 3590 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 AC017071.1-201ENST00000564407 2204 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 MIR200C-201ENST00000384980 68 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP354-201ENST00000391247 136 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 AC093578.1-201ENST00000415219 368 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 OR9P1P-201ENST00000496431 281 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-126P-201ENST00000516685 103 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 MIR3129-201ENST00000581095 76 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 MIR4444-1-201ENST00000581696 74 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 MIR4444-2-201ENST00000584390 74 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 AL442128.1-201ENST00000615151 90 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 AC002064.3-201ENST00000623448 346 ntBASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.78□□□□□ -1.8
NUCKS1Q9H1E3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 SNORA63.5-201ENST00000363548 123 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 SNORA1-201ENST00000384107 130 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-975P-201ENST00000384296 105 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 AC016717.1-201ENST00000448918 286 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 RNU7-14P-201ENST00000459331 62 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 AC110768.1-201ENST00000509222 400 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 RN7SKP18-201ENST00000516005 275 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.77□□□□□ -1.81
NUCKS1Q9H1E3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AL161912.2-201ENST00000565707 3007 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 SNORD9-201ENST00000362566 104 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 SNORA71.3-201ENST00000362582 128 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-573P-201ENST00000383938 106 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RNY1P7-201ENST00000384743 110 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-750P-201ENST00000390946 107 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RNA5SP171-201ENST00000391071 115 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RPS4XP11-201ENST00000446897 772 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 ATP5EP1-201ENST00000510257 156 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 MIR449C-201ENST00000516047 92 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-113P-201ENST00000516653 101 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AC079598.5-201ENST00000547460 117 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 MIR92B-201ENST00000607575 96 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AC096577.2-201ENST00000611455 153 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AL137067.1-201ENST00000615933 120 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AC006435.5-201ENST00000624486 112 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 AC009093.8-201ENST00000641769 292 ntBASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.76□□□□□ -1.81
NUCKS1Q9H1E3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-805P-201ENST00000365643 106 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 AC007064.1-201ENST00000412238 351 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 RPS3AP1-201ENST00000413190 320 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 AC063976.3-201ENST00000426849 329 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 AC106707.2-201ENST00000484182 374 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 RN7SKP12-201ENST00000516275 143 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 SNORA70.18-201ENST00000516696 98 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 MIR3922-201ENST00000585192 84 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 AL589743.1-201ENST00000551932 2712 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms