Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 AC005828.6-201ENST00000606610 232 ntBASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 AP001282.2-201ENST00000616149 309 ntBASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 AC006435.5-201ENST00000624486 112 ntBASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
TRIM54Q9BYV2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 AC062016.1-201ENST00000355719 319 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 MIR335-201ENST00000362173 94 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 SNORD114-6-201ENST00000364393 72 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 Y_RNA.237-201ENST00000364439 102 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 SNORD114-30-201ENST00000364448 72 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 SNORA20B-201ENST00000384220 132 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 RNU6-505P-201ENST00000384427 107 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 AC016909.1-201ENST00000415916 166 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 MRPS10P1-201ENST00000448483 130 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 AL139109.1-201ENST00000455491 297 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 HMGB3P3-201ENST00000510526 400 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 RNU6-436P-201ENST00000516171 114 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 SCARNA24.2-201ENST00000516968 130 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 AL033523.1-201ENST00000605153 153 ntBASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM54Q9BYV2 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNA5SP493-201ENST00000364115 91 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 Y_RNA.518-201ENST00000384552 113 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 MIR873-201ENST00000401120 77 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNU6-710P-201ENST00000410424 105 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AC060773.1-201ENST00000421698 310 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AL353689.1-201ENST00000438895 199 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 SNORD127-201ENST00000458892 86 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RNU6-1132P-201ENST00000459214 107 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AC011406.1-201ENST00000512440 370 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 SERF1AP1-201ENST00000514575 187 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 SUMO2P18-201ENST00000518873 252 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 SNORD14A-201ENST00000606526 91 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM54Q9BYV2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TRIM54Q9BYV2 RNU1-58P-201ENST00000362413 163 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 SNORD114-7-201ENST00000362520 77 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.136-201ENST00000363444 102 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 RNU6-407P-201ENST00000365280 104 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 AL355796.1-201ENST00000406706 323 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 RNU2-38P-201ENST00000410856 79 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 HMGN2P34-201ENST00000437647 269 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 RPL39P38-201ENST00000467018 153 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 AC023157.2-201ENST00000540596 141 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 DEFB117-201ENST00000602356 141 ntBASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.14-201ENST00000362415 103 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 SNORA27.1-201ENST00000362604 124 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AC010154.1-201ENST00000425857 269 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AL121890.1-201ENST00000435457 205 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RPS27P22-201ENST00000478056 241 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AL137100.2-201ENST00000555786 315 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 MIR3145-201ENST00000580727 82 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 AL512605.2-201ENST00000592972 256 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.15-201ENST00000611544 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.16-201ENST00000613119 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.12-201ENST00000613778 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.20-201ENST00000613956 192 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.9-201ENST00000615427 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 MIR6817-201ENST00000615588 66 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.11-201ENST00000616345 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.2-201ENST00000616535 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.3-201ENST00000617785 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.19-201ENST00000618602 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RNU2-1-201ENST00000618664 191 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms