Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNU1-139P-201ENST00000391307 165 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 RNU6-1186P-201ENST00000410429 97 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 MTND3P8-201ENST00000412909 339 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 USP9YP16-201ENST00000430287 407 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 MTND4P18-201ENST00000447010 465 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 USP9YP23-201ENST00000455085 407 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AC018710.1-201ENST00000506509 158 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AC010598.1-201ENST00000510378 103 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 RNU6-1016P-201ENST00000516689 94 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 RNU7-28P-201ENST00000516759 62 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AK6P2-201ENST00000549020 471 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 AC060780.3-201ENST00000589464 80 ntBASIC1.8□□□□□ -2.12
CHMP4AQ9BY43 Y_RNA.106-201ENST00000363189 100 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 RNU6-440P-201ENST00000390882 105 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 AC074085.1-201ENST00000413598 418 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 RNU7-40P-201ENST00000516397 64 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 AL121579.1-201ENST00000555129 305 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 AC008269.2-201ENST00000561915 1105 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 AL390123.1-201ENST00000603216 237 ntBASIC1.79□□□□□ -2.12
CHMP4AQ9BY43 RNU1-22P-201ENST00000363334 158 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 MIR548K-201ENST00000408406 116 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 Y_RNA.594-201ENST00000410373 140 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 MTCO3P19-201ENST00000415864 321 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 AC107399.1-201ENST00000451226 265 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 SUMO1P2-201ENST00000452524 304 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 RNU7-87P-201ENST00000459343 62 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 AC026782.1-201ENST00000512952 449 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 AC108729.3-201ENST00000513484 108 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 RNU6-358P-201ENST00000516564 75 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 AC018630.2-201ENST00000534866 2403 ntBASIC1.78□□□□□ -2.12
CHMP4AQ9BY43 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 FGF7P8-201ENST00000402994 292 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 RNU6-1050P-201ENST00000410388 107 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.595-201ENST00000410403 105 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 AC046134.1-201ENST00000514454 666 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 RNU7-128P-201ENST00000517247 62 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 AC093023.1-201ENST00000547375 507 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 RPL21P9-201ENST00000556149 474 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 MIR4438-201ENST00000585271 93 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 MTND5P16-201ENST00000460269 1703 ntBASIC1.77□□□□□ -2.13
CHMP4AQ9BY43 RNU6-601P-201ENST00000384540 107 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 MTCYBP4-201ENST00000401524 249 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 AL353997.1-201ENST00000432936 108 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 AC005002.2-201ENST00000438228 269 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.670-201ENST00000516255 105 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 SNORA31.10-201ENST00000516482 106 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 AC027419.1-201ENST00000522976 328 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 AC090617.3-201ENST00000573670 475 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 AC098679.4-201ENST00000624241 654 ntBASIC1.76□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.72-201ENST00000362894 103 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 MIR660-201ENST00000385235 97 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 RNU6-700P-201ENST00000391043 107 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 RPL23AP36-201ENST00000413895 458 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 SNORA31.4-201ENST00000516049 129 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.708-201ENST00000516950 96 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 SUMO2P16-201ENST00000519475 264 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AC091144.1-201ENST00000519573 138 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 FRG2DP-202ENST00000566967 323 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AC080078.2-201ENST00000603766 501 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AC005014.2-201ENST00000607795 599 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AC009229.3-201ENST00000608056 282 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 AC012676.2-201ENST00000619258 186 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 SNORD3E-202ENST00000627253 216 ntBASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHMP4AQ9BY43 RNU6-593P-201ENST00000364716 112 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 MIR190B-201ENST00000401119 79 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 UBE2V1P7-201ENST00000446395 340 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 RPL7P42-201ENST00000481005 679 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 RNU6-322P-201ENST00000516010 103 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 SNORD116-28-201ENST00000516123 91 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 AL357312.1-201ENST00000603879 298 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.74□□□□□ -2.13
CHMP4AQ9BY43 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNA5SP327-201ENST00000362494 101 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNY1P16-201ENST00000363063 111 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNU4-76P-201ENST00000364509 141 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 Y_RNA.338-201ENST00000365320 114 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNU6-1264P-201ENST00000383891 107 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNU6-281P-201ENST00000384212 103 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 MIR758-201ENST00000390227 88 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RPL23AP50-201ENST00000434149 455 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 AL606517.2-201ENST00000442855 241 ntBASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.73□□□□□ -2.13
CHMP4AQ9BY43 RPS27P22-201ENST00000478056 241 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms