Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RPS26P45-201ENST00000471748 340 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 AC021205.2-201ENST00000480069 347 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.62□□□□□ -1.83
ARID3AQ99856 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.62□□□□□ -1.83
ARID3AQ99856 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.62□□□□□ -1.83
ARID3AQ99856 RNU7-128P-201ENST00000517247 62 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.62□□□□□ -1.83
ARID3AQ99856 AC022080.3-201ENST00000544433 482 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 SNORD14A-201ENST00000606526 91 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 AL008718.3-201ENST00000610217 321 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 MIR6733-201ENST00000635723 61 ntBASIC3.62□□□□□ -1.83
ARID3AQ99856 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.62□□□□□ -1.83
ARID3AQ99856 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
ARID3AQ99856 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.61□□□□□ -1.83
ARID3AQ99856 SNORA11.4-201ENST00000408823 129 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 RN7SKP111-201ENST00000410349 271 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 EBAG9P1-201ENST00000418955 543 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 BTF3P11-201ENST00000426582 477 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 AC104332.1-201ENST00000440471 797 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.61□□□□□ -1.83
ARID3AQ99856 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.61□□□□□ -1.83
ARID3AQ99856 AC027419.1-201ENST00000522976 328 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 AP003357.1-201ENST00000604497 148 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 AC022513.1-201ENST00000624512 117 ntBASIC3.61□□□□□ -1.83
ARID3AQ99856 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.6□□□□□ -1.83
ARID3AQ99856 AL356292.1-201ENST00000283110 373 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 RNU1-70P-201ENST00000362618 164 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 RNU6-144P-201ENST00000383951 107 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 MIR1298-201ENST00000408783 112 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 RNU6-651P-201ENST00000411040 105 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 RNA5SP270-201ENST00000411361 118 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 RPS15AP28-201ENST00000435088 386 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.6□□□□□ -1.83
ARID3AQ99856 RN7SL807P-201ENST00000470923 297 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 YWHAEP4-201ENST00000505390 198 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 FCF1P8-201ENST00000510322 597 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.6□□□□□ -1.83
ARID3AQ99856 RNU7-115P-201ENST00000516433 55 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.6□□□□□ -1.83
ARID3AQ99856 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.6□□□□□ -1.83
ARID3AQ99856 MIR5692C2-201ENST00000577959 77 ntBASIC3.6□□□□□ -1.83
ARID3AQ99856 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ARID3AQ99856 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
ARID3AQ99856 RNU1-33P-201ENST00000364249 162 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 SNORD116-13-201ENST00000384408 92 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 MIR518C-201ENST00000384822 101 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 MIR562-201ENST00000384894 95 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 AL135786.1-201ENST00000415892 214 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 BX510359.4-201ENST00000423750 193 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 MTND2P29-201ENST00000438595 412 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 AC010409.1-201ENST00000487382 476 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 RNU1-104P-201ENST00000517280 175 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 AC015720.1-201ENST00000565251 277 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 AC245884.12-201ENST00000615364 59 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 U6.108-201ENST00000637764 58 ntBASIC3.59□□□□□ -1.83
ARID3AQ99856 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ARID3AQ99856 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ARID3AQ99856 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
ARID3AQ99856 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ARID3AQ99856 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ARID3AQ99856 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ARID3AQ99856 Y_RNA.172-201ENST00000363765 102 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 MIR520G-201ENST00000385064 90 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 UQCRHP3-201ENST00000451503 251 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 U8.19-201ENST00000459095 133 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 RNU7-94P-201ENST00000459576 63 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 RPS29P21-201ENST00000496272 170 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 RNU1-142P-201ENST00000516682 145 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.58□□□□□ -1.84
ARID3AQ99856 AC130289.1-201ENST00000577321 73 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 MIR548AY-201ENST00000617669 107 ntBASIC3.58□□□□□ -1.84
ARID3AQ99856 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.58□□□□□ -1.84
ARID3AQ99856 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ARID3AQ99856 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.57□□□□□ -1.84
ARID3AQ99856 Y_RNA.626-201ENST00000411288 95 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 AC099677.2-201ENST00000436385 175 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 RNU7-141P-201ENST00000459304 62 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.57□□□□□ -1.84
ARID3AQ99856 SNORD116-28-201ENST00000516123 91 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 SNORA31.25-201ENST00000517242 134 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.57□□□□□ -1.84
ARID3AQ99856 MIR4276-201ENST00000584832 70 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.57□□□□□ -1.84
ARID3AQ99856 Z83818.1-201ENST00000603584 150 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 AC006386.2-201ENST00000624491 75 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 AC012005.1-201ENST00000624575 75 ntBASIC3.57□□□□□ -1.84
ARID3AQ99856 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.57□□□□□ -1.84
ARID3AQ99856 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.57□□□□□ -1.84
ARID3AQ99856 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ARID3AQ99856 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ARID3AQ99856 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ARID3AQ99856 Y_RNA.83-201ENST00000363005 113 ntBASIC3.56□□□□□ -1.84
ARID3AQ99856 SNORD115-3-201ENST00000363100 82 ntBASIC3.56□□□□□ -1.84
ARID3AQ99856 Y_RNA.199-201ENST00000364014 102 ntBASIC3.56□□□□□ -1.84
ARID3AQ99856 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms