Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RNU6-261P-201ENST00000459506 102 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC091021.1-201ENST00000468051 388 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC107401.1-201ENST00000503426 685 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 RNU6-341P-201ENST00000516973 96 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 RNU7-172P-201ENST00000517125 64 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC091144.1-201ENST00000519573 138 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 UBL5P4-201ENST00000562584 236 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC091178.2-201ENST00000584401 117 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC087752.4-201ENST00000605911 462 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 Y_RNA.184-201ENST00000363884 108 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 RNU6-790P-201ENST00000384479 105 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 RNU6-541P-201ENST00000384709 110 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 MIR526A1-201ENST00000384897 85 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 RPL30P16-201ENST00000419341 429 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.45□□□□□ -2.34
VAT1Q99536 RPS3AP17-201ENST00000472594 777 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 MTCO2P30-201ENST00000503662 364 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 SNORD111.1-201ENST00000516421 86 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 AC022868.1-201ENST00000517767 391 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 MTND1P15-201ENST00000579262 949 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 AC073648.5-201ENST00000603502 305 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
VAT1Q99536 AC121333.1-201ENST00000567488 2709 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 RNA5SP264-201ENST00000363115 107 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 Y_RNA.151-201ENST00000363566 112 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 Y_RNA.179-201ENST00000363844 90 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 RNU6-280P-201ENST00000364145 104 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 Y_RNA.296-201ENST00000364930 108 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 SNORA75-201ENST00000384158 137 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 MIR562-201ENST00000384894 95 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 RNA5SP482-201ENST00000391269 118 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 CALM2P3-201ENST00000400429 449 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 SNORD99-201ENST00000408612 74 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.44□□□□□ -2.34
VAT1Q99536 RPL30P10-201ENST00000488148 337 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 RNU6-1223P-201ENST00000517124 104 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 AC104383.1-201ENST00000530297 370 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.44□□□□□ -2.34
VAT1Q99536 RPL21P9-201ENST00000556149 474 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 AP001330.5-201ENST00000607176 411 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 AC068137.4-201ENST00000638485 296 ntBASIC0.44□□□□□ -2.34
VAT1Q99536 ELL2P3-201ENST00000457883 1602 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 Y_RNA.330-201ENST00000365230 109 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 SNORA69-201ENST00000383895 132 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 SNORA20B-201ENST00000384220 132 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 MIR514A2-201ENST00000385131 88 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 MIR514A3-201ENST00000385132 88 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AL162725.1-201ENST00000435405 301 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC233266.1-201ENST00000454518 96 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 U7.7-201ENST00000459276 60 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC083798.1-201ENST00000472671 131 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AP000870.1-201ENST00000472927 406 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC093303.1-201ENST00000514549 295 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 RNU6-1116P-201ENST00000517269 99 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AP002004.2-201ENST00000531656 154 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC023827.1-201ENST00000569247 97 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 PIGPP4-201ENST00000584447 307 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC131055.1-201ENST00000584626 316 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC010620.1-201ENST00000601088 1102 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 AC242852.1-201ENST00000612151 96 ntBASIC0.43□□□□□ -2.34
VAT1Q99536 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
VAT1Q99536 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 SNORD89-201ENST00000390981 114 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 RPL23AP50-201ENST00000434149 455 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 Z98949.2-201ENST00000440996 144 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.42□□□□□ -2.34
VAT1Q99536 PCMTD1P1-201ENST00000455560 355 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 HMGN2P26-201ENST00000463169 339 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC083904.1-201ENST00000487828 231 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
VAT1Q99536 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.42□□□□□ -2.34
VAT1Q99536 RNU6-1291P-201ENST00000516591 104 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.42□□□□□ -2.34
VAT1Q99536 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC025627.3-201ENST00000582078 182 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC073114.1-201ENST00000612027 490 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 AC093913.1-201ENST00000614178 329 ntBASIC0.42□□□□□ -2.34
VAT1Q99536 RNU6-254P-201ENST00000363377 107 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 RNU6-522P-201ENST00000364497 107 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 RNU4-55P-201ENST00000410731 137 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 RNU6-107P-201ENST00000516643 102 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 AP003716.2-201ENST00000528260 108 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.41□□□□□ -2.34
VAT1Q99536 AC109810.1-201ENST00000534066 224 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 7SK.7-201ENST00000603504 247 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 SEPT14P17-201ENST00000617978 177 ntBASIC0.41□□□□□ -2.34
VAT1Q99536 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
VAT1Q99536 RNU6-833P-201ENST00000363486 107 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 RNU5F-3P-201ENST00000363767 117 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 RNU4-41P-201ENST00000364426 143 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 RNU6-128P-201ENST00000383976 107 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 MTND1P11-201ENST00000456661 876 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 Y_RNA.695-201ENST00000516715 107 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms