Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-514P-201ENST00000384208 107 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 MIR643-201ENST00000385267 97 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 SNORD100-201ENST00000408573 76 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 MTND1P8-201ENST00000571424 950 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 MIR4703-201ENST00000577728 79 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AC069431.2-201ENST00000604149 1099 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AL021368.1-201ENST00000607490 540 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AL133173.2-201ENST00000614270 90 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 AC091925.1-201ENST00000623204 462 ntBASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP1S3Q96PC3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 MIR330-201ENST00000362196 94 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AL390729.2-201ENST00000416137 156 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC005534.2-201ENST00000431047 433 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 MTND4P18-201ENST00000447010 465 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 RPL23AP75-201ENST00000491601 451 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC010598.1-201ENST00000510378 103 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 MIR5583-1-201ENST00000580941 59 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 RN7SL793P-201ENST00000583259 296 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 AC008608.1-201ENST00000603910 127 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 MIR4251-201ENST00000635819 61 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 MTND4P12-201ENST00000498999 1377 ntBASIC-0.34□□□□□ -2.46
AP1S3Q96PC3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 SNORD114-26-201ENST00000363543 72 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 SNORA2A-201ENST00000383885 135 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNU6V-201ENST00000384105 107 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 SNORA20B-201ENST00000384220 132 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 MTND1P4-201ENST00000435196 415 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 AC069271.1-201ENST00000445577 156 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 SNORD123-201ENST00000459473 70 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNU7-43P-201ENST00000516554 64 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RNU6-63P-201ENST00000516690 95 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 AC091144.1-201ENST00000519573 138 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 RPL21P9-201ENST00000556149 474 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 MIR4771-2-201ENST00000577758 74 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 MIR4771-1-201ENST00000582617 74 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 MIR4676-201ENST00000583078 72 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 MIR8076-201ENST00000611401 83 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 AC006435.5-201ENST00000624486 112 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 SEPT14P19-203ENST00000633205 211 ntBASIC-0.35□□□□□ -2.47
AP1S3Q96PC3 AC117470.1-201ENST00000381974 330 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MIR193B-201ENST00000384907 83 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MIR136-201ENST00000385207 82 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MIR518E-201ENST00000385252 88 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 SNORD28B-201ENST00000390993 75 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MIR1287-201ENST00000408492 90 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 AL512286.1-201ENST00000439244 400 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 RNU7-167P-201ENST00000459160 62 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 AC105417.1-201ENST00000514691 285 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 SNORA40.12-201ENST00000516329 111 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 RNU6-410P-201ENST00000517006 107 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 AC069113.1-201ENST00000517763 267 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MTND1P35-201ENST00000526739 508 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 AC022878.1-201ENST00000530684 149 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 MIR3124-201ENST00000582636 67 ntBASIC-0.36□□□□□ -2.47
AP1S3Q96PC3 SNORD68-201ENST00000363214 84 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU6-501P-201ENST00000364072 100 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU6-245P-201ENST00000384020 107 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU6-636P-201ENST00000384598 107 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 MIR610-201ENST00000385139 96 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 MIR320B2-201ENST00000408479 138 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU6-195P-201ENST00000411352 109 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 MTND4P32-201ENST00000437189 1237 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 SUMO1P2-201ENST00000452524 304 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 AC091179.3-201ENST00000474761 144 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 AC091885.1-201ENST00000506658 268 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU4-49P-201ENST00000516080 140 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 SNORA25.14-201ENST00000516481 132 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 AL355375.2-201ENST00000574825 175 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms