Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC091544.4-201ENST00000555268 342 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC055872.1-201ENST00000570978 278 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC006380.1-201ENST00000603598 186 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC016925.2-201ENST00000605108 242 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AL359075.3-201ENST00000613288 217 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC022140.2-201ENST00000623500 188 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 Y_RNA.243-201ENST00000364481 109 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNA5SP37-201ENST00000365420 130 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNU6-823P-201ENST00000391042 103 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNA5SP467-201ENST00000391274 118 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AL355796.1-201ENST00000406706 323 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNA5SP100-201ENST00000410903 110 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNA5SP59-201ENST00000410922 110 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RPEP5-201ENST00000441137 268 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC069257.2-201ENST00000441819 155 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC027419.1-201ENST00000522976 328 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC084364.2-201ENST00000546924 395 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 MIR4299-201ENST00000577899 72 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC138Q96M89 U6.73-201ENST00000619194 103 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CCDC138Q96M89 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
CCDC138Q96M89 AC010615.1-201ENST00000594254 1764 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC138Q96M89 MTND4P1-201ENST00000457501 1466 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU6-112P-201ENST00000363599 104 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU6-271P-201ENST00000363858 105 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU6-694P-201ENST00000364071 147 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 Y_RNA.462-201ENST00000384268 102 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNA5SP323-201ENST00000391094 133 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU2-54P-201ENST00000410299 190 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU5A-5P-201ENST00000411054 116 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNA5SP247-201ENST00000411181 105 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 AC009310.1-201ENST00000414414 451 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 AL390729.2-201ENST00000416137 156 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RPS27P22-201ENST00000478056 241 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 RNU2-12P-201ENST00000517216 168 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 AC005828.6-201ENST00000606610 232 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
CCDC138Q96M89 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC138Q96M89 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 Y_RNA.101-201ENST00000363154 102 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 SNORA33.2-201ENST00000365413 134 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 AC245047.4-201ENST00000433189 144 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 AC005002.2-201ENST00000438228 269 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 Y_RNA.715-201ENST00000517082 110 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 MIR4438-201ENST00000585271 93 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC138Q96M89 AL627230.6-201ENST00000611129 280 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 AC040896.1-201ENST00000613819 479 ntBASIC2.22□□□□□ -2.05
CCDC138Q96M89 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC138Q96M89 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CCDC138Q96M89 SNORA27.1-201ENST00000362604 124 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 SNORA33-201ENST00000363664 130 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 Y_RNA.380-201ENST00000365663 111 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 RNU6-1011P-201ENST00000384668 107 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 MIR1252-201ENST00000408861 65 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 RNU6-1186P-201ENST00000410429 97 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 EBAG9P1-201ENST00000418955 543 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 MRPS10P1-201ENST00000448483 130 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC138Q96M89 RNU7-99P-201ENST00000516271 62 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AC023157.2-201ENST00000540596 141 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AL442663.2-201ENST00000554385 511 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC138Q96M89 MIR4423-201ENST00000580922 80 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC138Q96M89 AC010900.2-201ENST00000604508 210 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 AC022441.3-201ENST00000605737 136 ntBASIC2.21□□□□□ -2.06
CCDC138Q96M89 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC138Q96M89 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC138Q96M89 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC138Q96M89 SNORD114-7-201ENST00000362520 77 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 RNU6-450P-201ENST00000364654 107 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 RNU6-1175P-201ENST00000365200 107 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 Y_RNA.446-201ENST00000384178 104 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 MIR873-201ENST00000401120 77 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
CCDC138Q96M89 AC010409.1-201ENST00000487382 476 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 RNA5SP20-201ENST00000515976 84 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 AL021879.1-201ENST00000611756 288 ntBASIC2.2□□□□□ -2.06
CCDC138Q96M89 PART1_1.1-201ENST00000611761 217 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms