Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RNU4-49P-201ENST00000516080 140 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 RNU6-718P-201ENST00000516166 105 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC7Q96M83 AC024995.1-201ENST00000523014 93 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 AC134698.4-201ENST00000523451 826 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
CCDC7Q96M83 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC7Q96M83 ZNF299P-201ENST00000406845 1804 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC7Q96M83 MIR302D-201ENST00000362275 68 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 U3.8-201ENST00000363675 217 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CCDC7Q96M83 RNA5SP109-201ENST00000391010 116 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 MIR1185-2-201ENST00000408687 86 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 AL139396.1-201ENST00000421137 167 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC7Q96M83 RPS26P45-201ENST00000471748 340 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 MIR4790-201ENST00000577799 79 ntBASIC1.31□□□□□ -2.2
CCDC7Q96M83 Y_RNA.48-201ENST00000362710 103 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 RNU5F-3P-201ENST00000363767 117 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 Y_RNA.179-201ENST00000363844 90 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 RNU6-595P-201ENST00000363944 107 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 Y_RNA.301-201ENST00000364990 103 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCDC7Q96M83 MRPL35P1-201ENST00000404272 572 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 USMG5P1-201ENST00000425964 177 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AL135790.2-201ENST00000437701 267 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AP000870.1-201ENST00000472927 406 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC7Q96M83 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC7Q96M83 AK6P2-201ENST00000549020 471 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 MIR5695-201ENST00000579717 85 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AC005730.3-201ENST00000583067 366 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 AL359075.3-201ENST00000613288 217 ntBASIC1.3□□□□□ -2.2
CCDC7Q96M83 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC7Q96M83 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 RNU6-1266P-201ENST00000362794 105 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC7Q96M83 MIR10B-201ENST00000385011 110 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 RNU6-1186P-201ENST00000410429 97 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 NDUFB4P10-201ENST00000452541 359 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC7Q96M83 Y_RNA.655-201ENST00000515919 96 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 Y_RNA.682-201ENST00000516457 100 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 MZT1P2-201ENST00000604387 248 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 AL121890.5-201ENST00000620848 304 ntBASIC1.29□□□□□ -2.2
CCDC7Q96M83 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC7Q96M83 Y_RNA.6-201ENST00000362350 114 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 RNU6-842P-201ENST00000384269 107 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 Y_RNA.490-201ENST00000384413 102 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AL356776.1-201ENST00000406574 447 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AC005002.2-201ENST00000438228 269 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 MTND1P34-201ENST00000438556 671 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AC027119.1-201ENST00000440877 241 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 Y_RNA.706-201ENST00000516933 99 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AL355802.3-201ENST00000607571 545 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 AC010999.1-201ENST00000611856 324 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.28□□□□□ -2.2
CCDC7Q96M83 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC7Q96M83 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.21
CCDC7Q96M83 MIR1277-201ENST00000408536 78 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC7Q96M83 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC7Q96M83 MTND3P23-201ENST00000431980 347 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AL606517.2-201ENST00000442855 241 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 SNORD5.1-201ENST00000458800 75 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AC093303.1-201ENST00000514549 295 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 RNU6-107P-201ENST00000516643 102 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AL442163.3-201ENST00000554110 156 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC7Q96M83 MIR4742-201ENST00000581069 85 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 RN7SL793P-201ENST00000583259 296 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AC018638.8-201ENST00000588755 281 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AL929325.1-201ENST00000603096 117 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 PRR13P7-201ENST00000605538 430 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 U6.108-201ENST00000637764 58 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 AC073869.6-201ENST00000640656 341 ntBASIC1.27□□□□□ -2.21
CCDC7Q96M83 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC7Q96M83 RNU6-222P-201ENST00000362438 107 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 Y_RNA.86-201ENST00000363020 111 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 RNU6-1105P-201ENST00000384774 107 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AC010154.1-201ENST00000425857 269 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 USP9YP16-201ENST00000430287 407 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 USP9YP23-201ENST00000455085 407 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 RNU6-329P-201ENST00000459618 107 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AC011352.1-201ENST00000512300 793 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 CBX3P8-201ENST00000532412 525 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 FRG2DP-202ENST00000566967 323 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AC022432.1-201ENST00000595739 310 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AC100812.1-201ENST00000607622 580 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AL078604.3-201ENST00000615580 211 ntBASIC1.26□□□□□ -2.21
CCDC7Q96M83 AC002553.4-201ENST00000616896 331 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms