Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC106754.2-201ENST00000623006 233 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 AL133216.2-202ENST00000634512 349 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 MIR337-201ENST00000362281 93 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.184-201ENST00000363884 108 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 RNU6-596P-201ENST00000365395 98 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AL603825.1-201ENST00000438481 80 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AC091144.1-201ENST00000519573 138 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 MTND2P38-201ENST00000522536 667 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 SNORA28-201ENST00000606769 126 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AC010999.1-201ENST00000611856 324 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
PKNOX2Q96KN3 SNORD116-2-201ENST00000384274 95 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 SNORD116-6-201ENST00000384711 96 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 STAG3L5P-204ENST00000443759 179 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC010469.2-201ENST00000496412 480 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC010598.1-201ENST00000510378 103 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 SNORA31.2-201ENST00000516019 134 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AL590705.4-201ENST00000532209 134 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC023157.2-201ENST00000540596 141 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 MIR4498-201ENST00000577599 66 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 AC024614.3-201ENST00000637860 256 ntBASIC0.86□□□□□ -2.27
PKNOX2Q96KN3 RNU6-199P-201ENST00000362954 107 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 RNU6-306P-201ENST00000384617 107 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 MTND3P21-201ENST00000433774 331 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 RNU6-506P-201ENST00000516553 94 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 AC027419.1-201ENST00000522976 328 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 AC024909.2-201ENST00000553035 286 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 MIR4778-201ENST00000577635 80 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 MIR4273-201ENST00000582824 84 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 MIR3942-201ENST00000585264 109 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 AL359821.1-201ENST00000605519 182 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 MIR6079-201ENST00000635807 62 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 ZNF299P-201ENST00000406845 1804 ntBASIC0.85□□□□□ -2.27
PKNOX2Q96KN3 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6-595P-201ENST00000363944 107 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6-1090P-201ENST00000364065 94 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNU6-373P-201ENST00000411247 98 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 MTCO3P19-201ENST00000415864 321 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 USMG5P1-201ENST00000425964 177 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 MTND5P15-201ENST00000434246 349 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 TRMT112P2-201ENST00000512910 132 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC109635.3-201ENST00000529536 185 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC090049.2-201ENST00000550377 109 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC004817.2-201ENST00000561794 651 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
PKNOX2Q96KN3 RNY1P10-201ENST00000363268 113 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-53P-201ENST00000365367 106 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-281P-201ENST00000384212 103 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-424P-201ENST00000384367 105 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 SNORD41-201ENST00000386967 70 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU1-139P-201ENST00000391307 165 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 MTND3P23-201ENST00000431980 347 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 AC097462.1-201ENST00000514125 324 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-864P-201ENST00000516256 108 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-314P-201ENST00000516574 104 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RNU6-107P-201ENST00000516643 102 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 AF250324.2-201ENST00000608299 610 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 AC103591.3-201ENST00000608684 209 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 uc_338.17-201ENST00000619633 179 ntBASIC0.83□□□□□ -2.28
PKNOX2Q96KN3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
PKNOX2Q96KN3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.82□□□□□ -2.28
PKNOX2Q96KN3 Y_RNA.194-201ENST00000363985 102 ntBASIC0.82□□□□□ -2.28
PKNOX2Q96KN3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 565 ms