Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MIR215-201ENST00000384858 110 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 MIR873-201ENST00000401120 77 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF428Q96B54 AC004817.2-201ENST00000561794 651 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF428Q96B54 MIR4300-201ENST00000581016 96 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 MIR3945-201ENST00000581853 98 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 AC091932.3-201ENST00000624223 323 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 U6.115-201ENST00000636045 103 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ZNF428Q96B54 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ZNF428Q96B54 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ZNF428Q96B54 Y_RNA.143-201ENST00000363520 106 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 SNORA3A-201ENST00000364113 130 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 Y_RNA.446-201ENST00000384178 104 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 RNU2-20P-201ENST00000410425 191 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 RPS12P2-201ENST00000439728 269 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 RNU7-110P-201ENST00000516891 62 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 RNU2-19P-201ENST00000517288 84 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 MIR4435-1-201ENST00000582552 80 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.26□□□□□ -1.89
ZNF428Q96B54 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF428Q96B54 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF428Q96B54 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF428Q96B54 RNA5SP393-201ENST00000363423 117 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 RNU6-379P-201ENST00000363813 104 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 SNORD114-6-201ENST00000364393 72 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 Y_RNA.376-201ENST00000365638 108 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 Y_RNA.581-201ENST00000391017 97 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 SNORD23.1-201ENST00000408212 104 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 RNU2-38P-201ENST00000410856 79 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF428Q96B54 HSPE1P13-201ENST00000451143 297 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 SNORD65B-201ENST00000459126 73 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 RNU6-1271P-201ENST00000517049 105 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 RNU6-570P-201ENST00000517051 105 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 AC023157.2-201ENST00000540596 141 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF428Q96B54 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF428Q96B54 U4.3-201ENST00000621047 82 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 MIR8062-201ENST00000621515 85 ntBASIC3.25□□□□□ -1.89
ZNF428Q96B54 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF428Q96B54 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF428Q96B54 AC016717.2-201ENST00000609089 5141 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 Y_RNA.19-201ENST00000362462 99 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 SNORA67.4-201ENST00000384688 142 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 MIR562-201ENST00000384894 95 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 RNU11-3P-201ENST00000391111 133 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 MIR1283-2-201ENST00000408621 87 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC060773.1-201ENST00000421698 310 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC108059.2-201ENST00000434626 151 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 RPS27AP9-201ENST00000477681 438 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 RNU6-388P-201ENST00000517012 105 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 RNU6-389P-201ENST00000517048 105 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC136932.1-201ENST00000574771 208 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 MIR5194-201ENST00000582634 120 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 AC037487.3-201ENST00000606668 112 ntBASIC3.24□□□□□ -1.89
ZNF428Q96B54 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF428Q96B54 RNU6-454P-201ENST00000364292 107 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 Y_RNA.331-201ENST00000365267 102 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 Y_RNA.477-201ENST00000384352 108 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 MIR518C-201ENST00000384822 101 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF428Q96B54 LINC01399-202ENST00000458450 244 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 Y_RNA.638-201ENST00000459374 113 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 RNY3P15-201ENST00000516297 97 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 RNU7-193P-201ENST00000516723 65 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AP002001.1-203ENST00000534002 267 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AC007229.1-201ENST00000590455 412 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AC010900.2-201ENST00000604508 210 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF428Q96B54 SDR42E1P4-201ENST00000620894 481 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AC078938.1-201ENST00000620993 318 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AC006001.4-201ENST00000622243 395 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 AC127459.3-201ENST00000624328 466 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 MTND5P6-201ENST00000422338 1798 ntBASIC3.23□□□□□ -1.89
ZNF428Q96B54 SNORD115-30-201ENST00000364117 82 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 Y_RNA.401-201ENST00000383965 117 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 Y_RNA.461-201ENST00000384263 103 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 RNU6-937P-201ENST00000384325 106 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 AC016909.1-201ENST00000415916 166 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 RNU7-94P-201ENST00000459576 63 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 YWHAEP4-201ENST00000505390 198 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 RNU6-155P-201ENST00000516347 100 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 AL359075.3-201ENST00000613288 217 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 MIR338-201ENST00000636369 67 ntBASIC3.22□□□□□ -1.89
ZNF428Q96B54 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ZNF428Q96B54 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ZNF428Q96B54 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF428Q96B54 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ZNF428Q96B54 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ZNF428Q96B54 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ZNF428Q96B54 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ZNF428Q96B54 SNORA27.1-201ENST00000362604 124 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 Y_RNA.188-201ENST00000363952 111 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 RNU1-138P-201ENST00000384093 164 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 SNORA48.1-201ENST00000390879 135 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 SNORA53-201ENST00000391141 249 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms