Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RTN4IP1Q8WWV3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
RTN4IP1Q8WWV3 RNU6-280P-201ENST00000364145 104 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 SNORA25.8-201ENST00000364831 128 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.557-201ENST00000384680 107 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 MIR329-1-201ENST00000385028 80 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 RNU6-510P-201ENST00000391239 108 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 ELOCP21-201ENST00000412558 336 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 COX6CP10-201ENST00000416832 224 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 PDCL2P1-201ENST00000419302 352 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC008134.1-201ENST00000420943 193 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 MRPL35P3-201ENST00000421557 364 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 EIF1P2-201ENST00000428233 350 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC027119.1-201ENST00000440877 241 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 SNORD65B-201ENST00000459126 73 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 RPS26P45-201ENST00000471748 340 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC105029.1-201ENST00000520250 669 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC011712.1-201ENST00000588959 234 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AL390123.1-201ENST00000603216 237 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AC100812.1-201ENST00000607622 580 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 AL365434.2-201ENST00000607979 234 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 MIR6078-201ENST00000611069 100 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 U6.73-201ENST00000619194 103 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 CASC19-280ENST00000642102 1351 ntBASIC0.93□□□□□ -2.26
RTN4IP1Q8WWV3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 RNY1P16-201ENST00000363063 111 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.160-201ENST00000363677 92 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 SNORA72.2-201ENST00000365028 127 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 MIR190B-201ENST00000401119 79 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 FGF7P8-201ENST00000402994 292 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AL355796.1-201ENST00000406706 323 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC074085.1-201ENST00000413598 418 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 USMG5P1-201ENST00000425964 177 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 FGF7P6-202ENST00000451282 293 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AL163540.1-201ENST00000485382 386 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC079140.2-201ENST00000506193 142 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 RNU6-237P-201ENST00000515985 71 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 7SK.7-201ENST00000603504 247 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AL359075.3-201ENST00000613288 217 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 AL078604.3-201ENST00000615580 211 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.248-201ENST00000364501 109 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 RNU6-318P-201ENST00000384283 103 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR618-201ENST00000385287 98 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 RPL37P10-201ENST00000412884 288 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC069257.2-201ENST00000441819 155 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC107399.1-201ENST00000451226 265 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC010469.2-201ENST00000496412 480 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC046134.1-201ENST00000514454 666 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 RNU1-142P-201ENST00000516682 145 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 SUMO2P16-201ENST00000519475 264 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC024995.1-201ENST00000523014 93 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR1244-1-201ENST00000612829 85 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR8054-201ENST00000620877 86 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR1244-3-201ENST00000635744 85 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR1244-2-201ENST00000636449 85 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 MIR1244-4-202ENST00000636813 85 ntBASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RTN4IP1Q8WWV3 RNU6-879P-201ENST00000364328 108 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 SNORA22-201ENST00000383907 134 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 SNORA22C-201ENST00000384614 134 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 MIR515-2-201ENST00000384883 83 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 MIR515-1-201ENST00000384884 83 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 AC245047.3-201ENST00000429428 127 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 AC092423.1-201ENST00000430165 186 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 AC022868.1-201ENST00000517767 391 ntBASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.9□□□□□ -2.27
RTN4IP1Q8WWV3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms