Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 AC105313.1-201ENST00000509121 353 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 RNU7-175P-201ENST00000515915 61 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 RNU6-1088P-201ENST00000516850 104 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 RNU6-165P-201ENST00000517170 99 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 AC134698.4-201ENST00000523451 826 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 FRG2DP-202ENST00000566967 323 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 AC021506.2-201ENST00000612354 169 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 RMST_2.1-201ENST00000617263 136 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.94□□□□□ -2.26
CDKL3Q8IVW4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-1266P-201ENST00000362794 105 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-623P-201ENST00000363143 105 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-1059P-201ENST00000363752 98 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU5F-3P-201ENST00000363767 117 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-42P-201ENST00000384165 107 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MIR10B-201ENST00000385011 110 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 AL589823.1-201ENST00000429577 183 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MTND4LP16-201ENST00000440828 295 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 RNU6-720P-201ENST00000516363 108 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 SUMO2P16-201ENST00000519475 264 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 AL590705.4-201ENST00000532209 134 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 AL137100.2-201ENST00000555786 315 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 EIF1P4-201ENST00000572664 335 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MIR5695-201ENST00000579717 85 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 AC022432.1-201ENST00000595739 310 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MIR8054-201ENST00000620877 86 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
CDKL3Q8IVW4 ZNF299P-201ENST00000406845 1804 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.3-201ENST00000362331 103 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.157-201ENST00000363638 102 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 RNU6-595P-201ENST00000363944 107 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.295-201ENST00000364918 102 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 RNU6-596P-201ENST00000365395 98 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 RNU6-1013P-201ENST00000384180 107 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.573-201ENST00000384763 105 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 USP9YP30-201ENST00000430729 455 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC093303.1-201ENST00000514549 295 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 SNORD116-28-201ENST00000516123 91 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 RNU1-54P-201ENST00000517181 120 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC011604.1-201ENST00000545978 196 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 FAM106DP-201ENST00000586416 501 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 AC010999.1-201ENST00000611856 324 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 U6.73-201ENST00000619194 103 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 MIR3662-201ENST00000637030 95 ntBASIC0.92□□□□□ -2.26
CDKL3Q8IVW4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MRPL42P3-201ENST00000401492 326 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 RNA5SP118-201ENST00000410385 109 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 RN7SKP200-201ENST00000410564 320 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MTND3P23-201ENST00000431980 347 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MTND4P18-201ENST00000447010 465 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MTND1P17-201ENST00000448961 204 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 RNU7-99P-201ENST00000516271 62 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 RNU6-566P-201ENST00000516790 107 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 AC091144.1-201ENST00000519573 138 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MIR3664-201ENST00000579074 99 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 MIR6128-201ENST00000615528 109 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 AC027335.2-201ENST00000624030 375 ntBASIC0.91□□□□□ -2.26
CDKL3Q8IVW4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
CDKL3Q8IVW4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 Y_RNA.184-201ENST00000363884 108 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 Y_RNA.318-201ENST00000365131 97 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 RNU6-842P-201ENST00000384269 107 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 RNU6-440P-201ENST00000390882 105 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 USMG5P1-201ENST00000425964 177 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 SNORD65B-201ENST00000459126 73 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 RNU6-107P-201ENST00000516643 102 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 AC027419.1-201ENST00000522976 328 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 APOOP3-201ENST00000536787 586 ntBASIC0.9□□□□□ -2.27
CDKL3Q8IVW4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms