Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC025465.3-201ENST00000510570 311 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.720-201ENST00000517166 92 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC008749.1-201ENST00000597650 306 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC069114.2-201ENST00000604699 304 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-112P-201ENST00000363599 104 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 RNU1-96P-201ENST00000364163 162 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 SNORD115-46-201ENST00000390982 71 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 RNA5SP467-201ENST00000391274 118 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 AC010409.1-201ENST00000487382 476 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 MRPS35P2-201ENST00000508242 191 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 AC010598.1-201ENST00000510378 103 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 MIR4713-201ENST00000582691 75 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PPP4R4Q6NUP7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 SNORA27.1-201ENST00000362604 124 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 SNORA72.2-201ENST00000365028 127 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-102P-201ENST00000384485 104 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 RNU4-30P-201ENST00000410245 143 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 RNA5SP57-201ENST00000459463 123 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 MTATP8P1-201ENST00000467115 207 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AC027419.1-201ENST00000522976 328 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 U6.73-201ENST00000619194 103 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
PPP4R4Q6NUP7 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.145-201ENST00000363527 102 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-296P-201ENST00000384608 107 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 MIR9-1-201ENST00000385198 89 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 DPH3P2-201ENST00000422618 250 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 MRPS10P1-201ENST00000448483 130 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 LINC01399-202ENST00000458450 244 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-436P-201ENST00000516171 114 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-155P-201ENST00000516347 100 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 AC023157.2-201ENST00000540596 141 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 MIR376A1-201ENST00000616574 68 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 AC006435.5-201ENST00000624486 112 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PPP4R4Q6NUP7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MIR1253-201ENST00000408273 105 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 RPL21P38-201ENST00000418090 167 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MTND2P23-201ENST00000422990 651 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 RPL23AP7-203ENST00000449021 469 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 HSPE1P25-201ENST00000455484 251 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 HMGB3P17-201ENST00000504195 649 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 MIR3684-201ENST00000579779 74 ntBASIC2.34□□□□□ -2.03
PPP4R4Q6NUP7 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.04
PPP4R4Q6NUP7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-770P-201ENST00000363929 105 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 MIR873-201ENST00000401120 77 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC005042.3-201ENST00000453230 174 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC098869.1-201ENST00000481627 292 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC084364.2-201ENST00000546924 395 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC008737.2-201ENST00000599446 118 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC011373.1-201ENST00000607270 237 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 AC010615.1-201ENST00000594254 1764 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
PPP4R4Q6NUP7 CENPCP1-201ENST00000533085 2578 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms