Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU1-70P-201ENST00000362618 164 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AL603914.1-201ENST00000401964 204 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC008134.1-201ENST00000420943 193 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 RNU6-498P-201ENST00000459468 107 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC092185.1-201ENST00000491371 97 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 RNU6-168P-201ENST00000516189 101 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 SNORA64.4-201ENST00000516632 81 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 MIR2681-201ENST00000581814 105 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC105245.1-201ENST00000581934 244 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 Pinc.1-201ENST00000616452 154 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC006435.5-201ENST00000624486 112 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
RNF20Q5VTR2 AC008555.8-201ENST00000623602 2168 ntBASIC3.92□□□□□ -1.78
RNF20Q5VTR2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 RNU6-1209P-201ENST00000363655 107 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 MIR548A1-201ENST00000385041 97 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 AC245102.2-201ENST00000448956 180 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 CYCSP35-201ENST00000451978 304 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 RPS26P45-201ENST00000471748 340 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 SNORA18.4-201ENST00000516440 124 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 RNU6-586P-201ENST00000517265 104 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 AC104027.1-201ENST00000521887 300 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 MIR3158-1-201ENST00000583596 81 ntBASIC3.91□□□□□ -1.78
RNF20Q5VTR2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
RNF20Q5VTR2 RNU6-486P-201ENST00000363116 107 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 RNU1-22P-201ENST00000363334 158 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 RNU6-647P-201ENST00000364243 107 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.796-201ENST00000364268 102 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.799-201ENST00000364992 102 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF20Q5VTR2 RNA5SP229-201ENST00000410809 99 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.617-201ENST00000410920 90 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF20Q5VTR2 SNORD11-201ENST00000459124 84 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 RN7SL293P-201ENST00000481765 281 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 MIR4438-201ENST00000585271 93 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 UCA1.1-201ENST00000620952 75 ntBASIC3.9□□□□□ -1.79
RNF20Q5VTR2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF20Q5VTR2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF20Q5VTR2 RNU1-72P-201ENST00000362976 153 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 RNU1-33P-201ENST00000364249 162 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 SNORA14A-201ENST00000364773 135 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 MIR490-201ENST00000384865 128 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 MIR449B-201ENST00000384995 97 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 MIR591-201ENST00000385290 95 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC006028.1-201ENST00000438379 402 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC115115.1-201ENST00000449927 248 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 RPL21P10-201ENST00000463521 490 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 SNORA67.7-201ENST00000516664 135 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 RNU7-149P-201ENST00000516739 59 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 RNU7-172P-201ENST00000517125 64 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC011604.1-201ENST00000545978 196 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC097639.2-201ENST00000603159 172 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AC004832.5-201ENST00000608677 401 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 MIR1248-201ENST00000629190 106 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF20Q5VTR2 AL353746.1-201ENST00000566293 6881 ntBASIC3.89□□□□□ -1.79
RNF20Q5VTR2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 AL136360.1-201ENST00000503377 1900 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 HMGN2P18-201ENST00000450680 270 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 AC097462.1-201ENST00000514125 324 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 MIR4474-201ENST00000579189 78 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 AC006254.2-201ENST00000603259 279 ntBASIC3.88□□□□□ -1.79
RNF20Q5VTR2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.52-201ENST00000362760 96 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 RNU6-743P-201ENST00000364151 106 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.309-201ENST00000365046 111 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 SNORA48.8-201ENST00000391324 134 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms