Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR4438-201ENST00000585271 93 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 SNORD81.1-201ENST00000363064 77 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RNU6-1309P-201ENST00000363305 108 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.149-201ENST00000363558 117 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.222-201ENST00000364264 102 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.286-201ENST00000364813 102 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RNA5SP467-201ENST00000391274 118 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AC010154.1-201ENST00000425857 269 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 IPO7P1-201ENST00000442031 636 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 MRPS10P1-201ENST00000448483 130 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RPL23AP7-203ENST00000449021 469 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RPL23AP3-201ENST00000453844 468 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF220Q5VTB9 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AC024995.1-201ENST00000523014 93 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AC023157.2-201ENST00000540596 141 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 GTF3AP2-201ENST00000557014 266 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 MIR5094-201ENST00000578766 85 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AC005000.2-201ENST00000605468 310 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 AL359075.3-201ENST00000613288 217 ntBASIC2.32□□□□□ -2.04
RNF220Q5VTB9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 snoU2_19.2-201ENST00000363024 80 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 SNORA16B-201ENST00000364674 135 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.329-201ENST00000365209 107 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 RNA5SP323-201ENST00000391094 133 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 RPL21P38-201ENST00000418090 167 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC096920.1-201ENST00000423991 241 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC063976.3-201ENST00000426849 329 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 POLR2KP2-201ENST00000438155 177 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 RNU1-142P-201ENST00000516682 145 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC005034.5-201ENST00000604219 466 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC069114.2-201ENST00000604699 304 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF220Q5VTB9 AC010615.1-201ENST00000594254 1764 ntBASIC2.31□□□□□ -2.04
RNF220Q5VTB9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
RNF220Q5VTB9 ZNF702P-202ENST00000434269 1966 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.47-201ENST00000362697 108 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.133-201ENST00000363428 110 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.383-201ENST00000383855 97 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 RNU2-61P-201ENST00000411069 191 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 AC024067.1-201ENST00000426199 223 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 HSPE1P25-201ENST00000455484 251 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 RNU7-99P-201ENST00000516271 62 ntBASIC2.3□□□□□ -2.04
RNF220Q5VTB9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RNF220Q5VTB9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 RNU6-505P-201ENST00000384427 107 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 RNU6-102P-201ENST00000384485 104 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 MIR215-201ENST00000384858 110 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 RNU6-710P-201ENST00000410424 105 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 EBAG9P1-201ENST00000418955 543 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 RPS26P55-201ENST00000471178 356 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 RNU7-172P-201ENST00000517125 64 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 AL033523.1-201ENST00000605153 153 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 U4.3-201ENST00000621047 82 ntBASIC2.29□□□□□ -2.04
RNF220Q5VTB9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RNF220Q5VTB9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RNF220Q5VTB9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RNU1-22P-201ENST00000363334 158 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RNU6-290P-201ENST00000365212 101 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.512-201ENST00000384518 102 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.569-201ENST00000384749 103 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RNU11-5P-201ENST00000391216 129 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RNU2-52P-201ENST00000410680 190 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF220Q5VTB9 AC097462.1-201ENST00000514125 324 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 MTCO2P24-201ENST00000515611 426 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms