Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 RNU6-881P-201ENST00000516813 102 ntBASIC-1.66□□□□□ -2.68
CCDC18Q5T9S5 AC245008.1-201ENST00000608123 476 ntBASIC-1.66□□□□□ -2.68
CCDC18Q5T9S5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 MIRLET7C-201ENST00000362160 84 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 RNY4P27-201ENST00000363341 96 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 RPL21P38-201ENST00000418090 167 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 AC090960.1-201ENST00000421072 306 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 MTND1P4-201ENST00000435196 415 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 AC010975.3-201ENST00000618727 978 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 AL008636.1-201ENST00000625038 1018 ntBASIC-1.67□□□□□ -2.68
CCDC18Q5T9S5 SNORD114-25-201ENST00000363742 72 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 MTND4P24-201ENST00000424002 397 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 POLR2KP2-201ENST00000438155 177 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 AC074290.1-201ENST00000448883 135 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 SUMO1P2-201ENST00000452524 304 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 SNORA18.7-201ENST00000516910 131 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 MIR3146-201ENST00000580367 79 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 AC005520.5-201ENST00000613926 164 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 FRG1KP-201ENST00000623592 341 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 AC005592.1-201ENST00000566527 1640 ntBASIC-1.68□□□□□ -2.68
CCDC18Q5T9S5 AL355143.1-201ENST00000407101 841 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-447P-201ENST00000410293 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-355P-201ENST00000410427 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-791P-201ENST00000410467 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-705P-201ENST00000410601 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-860P-201ENST00000410860 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-785P-201ENST00000411324 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 MTND2P6-201ENST00000455337 1030 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 DEFB108A-201ENST00000530110 222 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AC008608.1-201ENST00000603910 127 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 U6.90-201ENST00000614007 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 U6.70-201ENST00000620287 104 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-396P-201ENST00000365369 105 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU7-57P-201ENST00000459540 60 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AL049829.1-201ENST00000465411 156 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNA5SP216-201ENST00000516111 123 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AC025647.1-201ENST00000517879 253 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 AC010525.2-201ENST00000590920 195 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 U6.73-201ENST00000619194 103 ntBASIC-1.69□□□□□ -2.68
CCDC18Q5T9S5 RNU4-36P-201ENST00000364294 144 ntBASIC-1.7□□□□□ -2.68
CCDC18Q5T9S5 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.7□□□□□ -2.68
CCDC18Q5T9S5 AC008134.1-201ENST00000420943 193 ntBASIC-1.7□□□□□ -2.68
CCDC18Q5T9S5 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.7□□□□□ -2.68
CCDC18Q5T9S5 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.7□□□□□ -2.68
CCDC18Q5T9S5 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 MIR802-201ENST00000390235 94 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 ELOCP21-201ENST00000412558 336 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 AL512326.2-201ENST00000426359 151 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 PCNPP5-201ENST00000452246 481 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 RNU6-469P-201ENST00000516253 101 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 RNU7-43P-201ENST00000516554 64 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 AC104383.1-201ENST00000530297 370 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 AC099654.8-201ENST00000637757 681 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 MTND4P9-201ENST00000507819 1346 ntBASIC-1.71□□□□□ -2.68
CCDC18Q5T9S5 RNU6-364P-201ENST00000384387 107 ntBASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 RNA5SP169-201ENST00000517268 117 ntBASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 AC125232.2-201ENST00000592457 143 ntBASIC-1.72□□□□□ -2.68
CCDC18Q5T9S5 MIR148A-201ENST00000362215 68 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 SNORD14.1-201ENST00000365609 90 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 RNU6-650P-201ENST00000365658 111 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 MIR208B-201ENST00000401172 77 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 RNU6-293P-201ENST00000411259 106 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 AC021146.9-201ENST00000512503 156 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 RNA5SP180-201ENST00000516181 101 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 MTND2P38-201ENST00000522536 667 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 U4.7-201ENST00000638126 106 ntBASIC-1.73□□□□□ -2.69
CCDC18Q5T9S5 MIR101-2-201ENST00000362195 79 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 RNU6-428P-201ENST00000362942 107 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 MIR873-201ENST00000401120 77 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 AC098592.1-201ENST00000419352 333 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 AL133396.1-201ENST00000432048 687 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 RNU7-102P-201ENST00000458948 62 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 AC103996.1-201ENST00000555468 102 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms