Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX4Q33E94 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX4Q33E94 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX4Q33E94 AC011712.1-201ENST00000588959 234 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC022432.1-201ENST00000595739 310 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AL390123.1-201ENST00000603216 237 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AP000942.3-201ENST00000603702 160 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC021506.2-201ENST00000612354 169 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX4Q33E94 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
RFX4Q33E94 RNY1P16-201ENST00000363063 111 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 RNU6-593P-201ENST00000364716 112 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 Y_RNA.599-201ENST00000410489 109 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 Y_RNA.619-201ENST00000410951 90 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX4Q33E94 AC107399.1-201ENST00000451226 265 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX4Q33E94 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
RFX4Q33E94 RNU7-95P-201ENST00000459222 64 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 RNU7-34P-201ENST00000459394 64 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 MTND4P17-201ENST00000470444 350 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX4Q33E94 Y_RNA.708-201ENST00000516950 96 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 RNU6-1213P-201ENST00000517075 94 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 AC027419.1-201ENST00000522976 328 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 AL121579.1-201ENST00000555129 305 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 CASC19-280ENST00000642102 1351 ntBASIC1.08□□□□□ -2.24
RFX4Q33E94 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
RFX4Q33E94 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.248-201ENST00000364501 109 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.279-201ENST00000364763 95 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.364-201ENST00000365532 101 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.482-201ENST00000384377 111 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.505-201ENST00000384489 102 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 Y_RNA.557-201ENST00000384680 107 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RFX4Q33E94 ELOCP21-201ENST00000412558 336 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 PDCL2P1-201ENST00000419302 352 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX4Q33E94 AL135790.2-201ENST00000437701 267 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX4Q33E94 AC079140.2-201ENST00000506193 142 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 SCARNA16.2-201ENST00000516520 172 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX4Q33E94 AP002001.1-203ENST00000534002 267 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX4Q33E94 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX4Q33E94 AC090617.3-201ENST00000573670 475 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 AL365434.2-201ENST00000607979 234 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 MIR8054-201ENST00000620877 86 ntBASIC1.07□□□□□ -2.24
RFX4Q33E94 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX4Q33E94 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
RFX4Q33E94 RNU6-767P-201ENST00000384132 107 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 RNU6-1145P-201ENST00000384246 107 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 RNU6-1031P-201ENST00000384773 107 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX4Q33E94 RNU7-87P-201ENST00000459343 62 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.06□□□□□ -2.24
RFX4Q33E94 AC046134.1-201ENST00000514454 666 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 RNU7-99P-201ENST00000516271 62 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 RNU6-107P-201ENST00000516643 102 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX4Q33E94 AC023157.2-201ENST00000540596 141 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX4Q33E94 AL137100.2-201ENST00000555786 315 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.06□□□□□ -2.24
RFX4Q33E94 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.06□□□□□ -2.24
RFX4Q33E94 AC092794.1-201ENST00000612734 582 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 AL078604.3-201ENST00000615580 211 ntBASIC1.06□□□□□ -2.24
RFX4Q33E94 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
RFX4Q33E94 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFX4Q33E94 RNU6-1266P-201ENST00000362794 105 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 Y_RNA.160-201ENST00000363677 92 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFX4Q33E94 RNU6-318P-201ENST00000384283 103 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 MIR513A1-201ENST00000385138 129 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 SNORA75.4-201ENST00000391278 119 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 BTF3P4-201ENST00000418852 495 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 AC245047.3-201ENST00000429428 127 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.05□□□□□ -2.24
RFX4Q33E94 MRPS10P1-201ENST00000448483 130 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 AC116353.2-201ENST00000505332 712 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 RNU6-120P-201ENST00000516077 103 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 Y_RNA.691-201ENST00000516611 103 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 MIR4438-201ENST00000585271 93 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
RFX4Q33E94 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.05□□□□□ -2.24
RFX4Q33E94 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RFX4Q33E94 RNU6-845P-201ENST00000362578 103 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms