Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR208B-201ENST00000401172 77 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 Y_RNA.594-201ENST00000410373 140 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 RNU6-370P-201ENST00000411008 104 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.47□□□□□ -2.17
PTCH1Q13635 AF228730.4-201ENST00000421457 183 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 MTND4P28-201ENST00000426217 387 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 AC236972.2-201ENST00000434979 310 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 DAP3P1-201ENST00000441522 278 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.47□□□□□ -2.17
PTCH1Q13635 SNORD19B-201ENST00000459623 84 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 RNA5SP384-201ENST00000516615 116 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.47□□□□□ -2.17
PTCH1Q13635 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.47□□□□□ -2.17
PTCH1Q13635 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.47□□□□□ -2.17
PTCH1Q13635 AL050343.2-201ENST00000607338 280 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 AC022513.1-201ENST00000624512 117 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.47□□□□□ -2.17
PTCH1Q13635 MTND4LP32-201ENST00000636111 270 ntBASIC1.47□□□□□ -2.17
PTCH1Q13635 RNU4-38P-201ENST00000364472 129 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 Y_RNA.259-201ENST00000364619 101 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 Y_RNA.404-201ENST00000383978 102 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 Y_RNA.473-201ENST00000384333 102 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MIR193B-201ENST00000384907 83 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 RNU6-360P-201ENST00000390944 104 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MTCYBP4-201ENST00000401524 249 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MIR1285-1-201ENST00000408593 84 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.46□□□□□ -2.18
PTCH1Q13635 MTCO2P27-201ENST00000420740 428 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AC012306.1-201ENST00000423267 114 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MTND3P9-201ENST00000429526 346 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.46□□□□□ -2.18
PTCH1Q13635 UBE2V1P7-201ENST00000446395 340 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 ELOCP24-201ENST00000456370 334 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 RNU7-152P-201ENST00000458982 64 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AL133255.1-201ENST00000606374 441 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.46□□□□□ -2.18
PTCH1Q13635 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.46□□□□□ -2.18
PTCH1Q13635 AC009229.3-201ENST00000608056 282 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AC084781.2-201ENST00000615568 161 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 PISRT1.1-201ENST00000616930 107 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AC126177.8-201ENST00000618339 1015 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 AC073544.1-201ENST00000600110 1595 ntBASIC1.46□□□□□ -2.18
PTCH1Q13635 MIR340-201ENST00000362125 95 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNU6-1059P-201ENST00000363752 98 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.187-201ENST00000363918 113 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.813-201ENST00000364639 102 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.419-201ENST00000384041 102 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.431-201ENST00000384086 102 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNU6-784P-201ENST00000384330 106 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNU6-296P-201ENST00000384608 107 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNU6-310P-201ENST00000384655 107 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 MIR521-1-201ENST00000384902 87 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 SNORA12.2-201ENST00000391040 156 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNY4P36-201ENST00000391116 96 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RNU6-1304P-201ENST00000411374 106 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.45□□□□□ -2.18
PTCH1Q13635 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.653-201ENST00000459091 95 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 RPL7P42-201ENST00000481005 679 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.45□□□□□ -2.18
PTCH1Q13635 ACA59.1-201ENST00000515966 143 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 MIR5696-201ENST00000578474 85 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 AC069114.2-201ENST00000604699 304 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 AC005520.5-201ENST00000613926 164 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 AL669831.3-213ENST00000636676 183 ntBASIC1.45□□□□□ -2.18
PTCH1Q13635 Y_RNA.2-201ENST00000362330 96 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 SNORD50.1-201ENST00000362987 71 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 RNU4-76P-201ENST00000364509 141 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 Y_RNA.460-201ENST00000384255 102 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 RNU6-331P-201ENST00000384724 107 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 Y_RNA.646-201ENST00000410980 101 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 RPS27P1-201ENST00000450552 247 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.44□□□□□ -2.18
PTCH1Q13635 MTCO3P10-201ENST00000455912 772 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC016925.1-201ENST00000458303 298 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC091874.1-201ENST00000511402 339 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 RNU6-1213P-201ENST00000517075 94 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.44□□□□□ -2.18
PTCH1Q13635 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.44□□□□□ -2.18
PTCH1Q13635 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.44□□□□□ -2.18
PTCH1Q13635 MIR4273-201ENST00000582824 84 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC090574.1-201ENST00000623186 233 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AL450472.1-202ENST00000637286 180 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 AC091812.1-201ENST00000432235 1948 ntBASIC1.44□□□□□ -2.18
PTCH1Q13635 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PTCH1Q13635 AC010615.1-201ENST00000594254 1764 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 Y_RNA.146-201ENST00000363549 102 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 RNU6-694P-201ENST00000364071 147 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 Y_RNA.315-201ENST00000365117 102 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
PTCH1Q13635 Y_RNA.579-201ENST00000390939 94 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 RNU6-1093P-201ENST00000391194 107 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 USMG5P1-201ENST00000425964 177 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 HSPE1P9-201ENST00000440046 311 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms