Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.59□□□□□ -2.31
FOXF1Q12946 AC099654.12-201ENST00000639868 649 ntBASIC0.59□□□□□ -2.31
FOXF1Q12946 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.32
FOXF1Q12946 RNU4-79P-201ENST00000362764 141 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 RNU6-451P-201ENST00000362921 107 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 Y_RNA.151-201ENST00000363566 112 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 RNU4-76P-201ENST00000364509 141 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 Y_RNA.415-201ENST00000384012 112 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MIR517A-201ENST00000385001 87 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
FOXF1Q12946 RNU1-139P-201ENST00000391307 165 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTCO3P19-201ENST00000415864 321 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTCO3P18-201ENST00000440206 761 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTND1P26-201ENST00000440488 538 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTND4P18-201ENST00000447010 465 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTND1P29-201ENST00000448112 647 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.58□□□□□ -2.32
FOXF1Q12946 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.58□□□□□ -2.32
FOXF1Q12946 RNU7-28P-201ENST00000516759 62 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 AC026407.1-201ENST00000518369 204 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.58□□□□□ -2.32
FOXF1Q12946 AC090049.2-201ENST00000550377 109 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 FRG2DP-202ENST00000566967 323 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 MTND1P15-201ENST00000579262 949 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 AC010525.2-201ENST00000590920 195 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 7SK.7-201ENST00000603504 247 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 AC009248.2-201ENST00000619826 254 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 SNORD3E-202ENST00000627253 216 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.58□□□□□ -2.32
FOXF1Q12946 MIR1321-201ENST00000637766 79 ntBASIC0.58□□□□□ -2.32
FOXF1Q12946 Y_RNA.179-201ENST00000363844 90 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 Y_RNA.414-201ENST00000384011 101 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 RNA5SP247-201ENST00000411181 105 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
FOXF1Q12946 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.57□□□□□ -2.32
FOXF1Q12946 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.57□□□□□ -2.32
FOXF1Q12946 MTATP6P17-201ENST00000431030 672 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC245047.7-201ENST00000440265 293 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 SNORD65B-201ENST00000459126 73 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 RPL30P10-201ENST00000488148 337 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.57□□□□□ -2.32
FOXF1Q12946 AC010598.1-201ENST00000510378 103 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 SCARNA16.2-201ENST00000516520 172 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 RN7SKP49-201ENST00000516675 260 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 RNU6-256P-201ENST00000516747 97 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.57□□□□□ -2.32
FOXF1Q12946 ZNF519P2-201ENST00000557032 169 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.57□□□□□ -2.32
FOXF1Q12946 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.57□□□□□ -2.32
FOXF1Q12946 MIR4438-201ENST00000585271 93 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC124303.1-201ENST00000605703 360 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 AC092954.2-201ENST00000609103 430 ntBASIC0.57□□□□□ -2.32
FOXF1Q12946 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-199P-201ENST00000362954 107 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 SNORD87-201ENST00000364849 89 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 SNORD114-24-201ENST00000365029 72 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-483P-201ENST00000384088 108 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 MIR10B-201ENST00000385011 110 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-1186P-201ENST00000410429 97 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 Y_RNA.615-201ENST00000410769 117 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-373P-201ENST00000411247 98 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 AC114482.1-201ENST00000418010 247 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 MTND1P1-201ENST00000445453 368 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 MTCO2P7-201ENST00000446518 666 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.56□□□□□ -2.32
FOXF1Q12946 AC105758.1-201ENST00000506038 399 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU7-175P-201ENST00000515915 61 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 SNORA31.2-201ENST00000516019 134 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 RNU6-1114P-201ENST00000516022 107 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 ACA64.5-201ENST00000516207 127 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.56□□□□□ -2.32
FOXF1Q12946 MTND3P12-201ENST00000559068 328 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 MIR3672-201ENST00000584290 82 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 AL357312.1-201ENST00000603879 298 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 AC019193.3-201ENST00000609144 554 ntBASIC0.56□□□□□ -2.32
FOXF1Q12946 ZNF299P-201ENST00000406845 1804 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 MIR410-201ENST00000362222 80 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 Y_RNA.184-201ENST00000363884 108 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 RNU6-595P-201ENST00000363944 107 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 SNORA2.2-201ENST00000365473 135 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 SNORD116-11-201ENST00000383882 92 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 SNORD116-1-201ENST00000384335 95 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 RNU6-424P-201ENST00000384367 105 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 RNU6-541P-201ENST00000384709 110 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 MIR200A-201ENST00000384875 90 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 SNORD41-201ENST00000386967 70 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AC063976.4-201ENST00000421971 163 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AL606490.4-201ENST00000423117 127 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AL590632.1-201ENST00000424289 371 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.55□□□□□ -2.32
FOXF1Q12946 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.55□□□□□ -2.32
FOXF1Q12946 AC097462.1-201ENST00000514125 324 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 SNORD79.1-201ENST00000516069 84 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 Y_RNA.683-201ENST00000516508 93 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AL358944.1-201ENST00000528537 144 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms