Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 AC025253.1-201ENST00000613623 543 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 AC084781.2-201ENST00000615568 161 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.33□□□□□ -2.2
CSTF1Q05048 AC112487.2-201ENST00000637950 304 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSTF1Q05048 Y_RNA.205-201ENST00000364128 113 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 Y_RNA.529-201ENST00000384586 119 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 RNA5SP467-201ENST00000391274 118 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 Y_RNA.594-201ENST00000410373 140 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC009161.1-201ENST00000417306 376 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC243428.1-201ENST00000421099 264 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC098614.3-201ENST00000438957 440 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 SNORD5.1-201ENST00000458800 75 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 RPL31P58-201ENST00000469001 379 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 RNU6-1146P-201ENST00000516282 102 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 SNORA25.14-201ENST00000516481 132 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 CBX3P8-201ENST00000532412 525 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
CSTF1Q05048 MIR548S-201ENST00000581352 82 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC018462.2-201ENST00000605375 395 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AL132765.2-201ENST00000610812 351 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC093913.1-201ENST00000614178 329 ntBASIC1.32□□□□□ -2.2
CSTF1Q05048 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.32□□□□□ -2.2
CSTF1Q05048 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.32□□□□□ -2.2
CSTF1Q05048 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CSTF1Q05048 Y_RNA.58-201ENST00000362807 102 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 Y_RNA.154-201ENST00000363624 102 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 SNORD87-201ENST00000364849 89 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 RNY3P1-201ENST00000365085 102 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 RNY3-201ENST00000365484 102 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 Y_RNA.490-201ENST00000384413 102 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC069257.2-201ENST00000441819 155 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC007215.1-201ENST00000464893 276 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 RPL30P10-201ENST00000488148 337 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 APOOP3-201ENST00000536787 586 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.31□□□□□ -2.2
CSTF1Q05048 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.31□□□□□ -2.2
CSTF1Q05048 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.31□□□□□ -2.2
CSTF1Q05048 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC124303.1-201ENST00000605703 360 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC005014.2-201ENST00000607795 599 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.31□□□□□ -2.2
CSTF1Q05048 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC104260.1-201ENST00000616660 539 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.31□□□□□ -2.2
CSTF1Q05048 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
CSTF1Q05048 RNU4-9P-201ENST00000364951 139 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 MIR586-201ENST00000385035 97 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 RNU6-510P-201ENST00000391239 108 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.3□□□□□ -2.2
CSTF1Q05048 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.3□□□□□ -2.2
CSTF1Q05048 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.3□□□□□ -2.2
CSTF1Q05048 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
CSTF1Q05048 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 MTND4P18-201ENST00000447010 465 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 MTCO3P10-201ENST00000455912 772 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.3□□□□□ -2.2
CSTF1Q05048 AC046134.1-201ENST00000514454 666 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 RAB11AP2-201ENST00000545905 639 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 SNORD11B-201ENST00000607707 90 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 AC009229.3-201ENST00000608056 282 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 snoZ196.1-201ENST00000625269 89 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 MTND4LP32-201ENST00000636111 270 ntBASIC1.3□□□□□ -2.2
CSTF1Q05048 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 Y_RNA.319-201ENST00000365138 92 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 Y_RNA.394-201ENST00000383942 103 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 RNU6-601P-201ENST00000384540 107 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 Y_RNA.646-201ENST00000410980 101 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.29□□□□□ -2.2
CSTF1Q05048 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.29□□□□□ -2.2
CSTF1Q05048 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.29□□□□□ -2.2
CSTF1Q05048 U8.22-201ENST00000459141 133 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 AC093852.1-201ENST00000503587 266 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.29□□□□□ -2.2
CSTF1Q05048 SCARNA16.2-201ENST00000516520 172 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 RNU6-1016P-201ENST00000516689 94 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 RNA5SP54-201ENST00000516951 92 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.29□□□□□ -2.2
CSTF1Q05048 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 MIR5696-201ENST00000578474 85 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.29□□□□□ -2.2
CSTF1Q05048 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.29□□□□□ -2.2
CSTF1Q05048 MIR4273-201ENST00000582824 84 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 UBE2V2P2-201ENST00000587677 504 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 AL353149.1-201ENST00000610667 244 ntBASIC1.29□□□□□ -2.2
CSTF1Q05048 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.29□□□□□ -2.2
CSTF1Q05048 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
CSTF1Q05048 RNU6-222P-201ENST00000362438 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms