Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MIR450B-201ENST00000401182 78 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 RNU6-195P-201ENST00000411352 109 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.13□□□□□ -2.43
H3F3AP84243 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.13□□□□□ -2.43
H3F3AP84243 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.13□□□□□ -2.43
H3F3AP84243 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.13□□□□□ -2.43
H3F3AP84243 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.13□□□□□ -2.43
H3F3AP84243 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 RNU11-2P-201ENST00000516898 142 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.13□□□□□ -2.43
H3F3AP84243 AC023442.1-201ENST00000531247 422 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.13□□□□□ -2.43
H3F3AP84243 MIR3612-201ENST00000579753 87 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 AC006435.5-201ENST00000624486 112 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 AC007671.2-201ENST00000637344 619 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 RNA5SP517-201ENST00000364724 117 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 RNU6-108P-201ENST00000365558 107 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 RNU6-245P-201ENST00000384020 107 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 MIR452-201ENST00000385020 85 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 SNORA40.8-201ENST00000411034 126 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 MTCO3P19-201ENST00000415864 321 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 PIGPP3-201ENST00000425307 415 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 GMFBP1-201ENST00000467831 427 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.14□□□□□ -2.43
H3F3AP84243 RPL23AP91-201ENST00000569211 455 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 AC091178.2-201ENST00000584401 117 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 AC006566.1-201ENST00000608943 513 ntBASIC-0.14□□□□□ -2.43
H3F3AP84243 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
H3F3AP84243 RNU6-727P-201ENST00000363592 107 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 RNA5SP95-201ENST00000410319 137 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AL353997.1-201ENST00000432936 108 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AL392103.1-201ENST00000447000 198 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.15□□□□□ -2.43
H3F3AP84243 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.15□□□□□ -2.43
H3F3AP84243 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.15□□□□□ -2.43
H3F3AP84243 RNA5SP54-201ENST00000516951 92 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 SNORA74.3-201ENST00000517108 154 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 MTND4P33-201ENST00000556706 766 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AC120024.3-201ENST00000603167 156 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AC104408.1-201ENST00000605241 170 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AL158050.2-201ENST00000605336 568 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 SNORA25.18-201ENST00000607153 114 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 AC018645.2-201ENST00000609151 472 ntBASIC-0.15□□□□□ -2.43
H3F3AP84243 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.15□□□□□ -2.43
H3F3AP84243 SNORD14.1-201ENST00000365609 90 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 RNU6-716P-201ENST00000365621 103 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 SNORA40.4-201ENST00000390971 128 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 MIR1302-7-201ENST00000408841 72 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.16□□□□□ -2.44
H3F3AP84243 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 ZNF114P1-201ENST00000453500 292 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.16□□□□□ -2.44
H3F3AP84243 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
H3F3AP84243 MIR3682-201ENST00000581338 84 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 AC010999.1-201ENST00000611856 324 ntBASIC-0.16□□□□□ -2.44
H3F3AP84243 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.16□□□□□ -2.44
H3F3AP84243 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.16□□□□□ -2.44
H3F3AP84243 RNU6-376P-201ENST00000384731 106 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 MIR516B2-201ENST00000385190 85 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.17□□□□□ -2.44
H3F3AP84243 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.17□□□□□ -2.44
H3F3AP84243 Z98949.2-201ENST00000440996 144 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.17□□□□□ -2.44
H3F3AP84243 PCNPP5-201ENST00000452246 481 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 AC010598.1-201ENST00000510378 103 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 SNORA25.14-201ENST00000516481 132 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.17□□□□□ -2.44
H3F3AP84243 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.17□□□□□ -2.44
H3F3AP84243 MIR4764-201ENST00000580680 88 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 AP000240.1-201ENST00000609910 452 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 AC090517.2-201ENST00000614966 680 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 MIR6779-201ENST00000617283 64 ntBASIC-0.17□□□□□ -2.44
H3F3AP84243 RNU6-500P-201ENST00000362349 107 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 RNU6-606P-201ENST00000384721 111 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 SSR1P2-201ENST00000415208 787 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AL008987.1-201ENST00000415528 237 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AC098592.1-201ENST00000419352 333 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.18□□□□□ -2.44
H3F3AP84243 AL137161.1-201ENST00000532231 390 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 MIR548AO-201ENST00000579992 96 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 RBM11P1-201ENST00000604951 799 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AC064836.2-201ENST00000609491 462 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AL355073.2-201ENST00000612106 557 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 MIR7844-201ENST00000616161 122 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AC104260.1-201ENST00000616660 539 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 AC027279.3-201ENST00000625055 122 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 MIR371B-201ENST00000638082 66 ntBASIC-0.18□□□□□ -2.44
H3F3AP84243 RNA5SP457-201ENST00000363657 124 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 MIR1298-201ENST00000408783 112 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 RNU2-29P-201ENST00000410423 189 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 MTND4P18-201ENST00000447010 465 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 MTATP6P14-201ENST00000455189 673 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 RPL23AP75-201ENST00000491601 451 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms