Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 U6.108-201ENST00000637764 58 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRAMEP78395 Y_RNA.5-201ENST00000362334 102 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 RNU6-454P-201ENST00000364292 107 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 SNORA72.2-201ENST00000365028 127 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 SNORA20B-201ENST00000384220 132 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PRAMEP78395 AL355796.1-201ENST00000406706 323 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 OOSP1P1-201ENST00000423265 274 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.81□□□□□ -2.12
PRAMEP78395 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
PRAMEP78395 AC010598.1-201ENST00000510378 103 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 MIR4438-201ENST00000585271 93 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.81□□□□□ -2.12
PRAMEP78395 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.81□□□□□ -2.12
PRAMEP78395 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRAMEP78395 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
PRAMEP78395 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PRAMEP78395 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 RNY3P4-201ENST00000384428 101 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 AC023442.1-201ENST00000531247 422 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 AC004467.1-201ENST00000615678 330 ntBASIC1.8□□□□□ -2.12
PRAMEP78395 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.8□□□□□ -2.12
PRAMEP78395 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRAMEP78395 MIR369-201ENST00000362155 70 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 Y_RNA.80-201ENST00000362996 102 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 RNU6-407P-201ENST00000365280 104 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 Y_RNA.485-201ENST00000384395 102 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.79□□□□□ -2.12
PRAMEP78395 AL606517.2-201ENST00000442855 241 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 FCF1P4-201ENST00000448326 183 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
PRAMEP78395 AC024995.1-201ENST00000523014 93 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.79□□□□□ -2.12
PRAMEP78395 AC055872.1-201ENST00000570978 278 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 MIR4659A-201ENST00000580269 81 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 MIR3945-201ENST00000581853 98 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 VN1R91P-201ENST00000594377 169 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 C8orf59P2-201ENST00000603441 271 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 MIR8074-201ENST00000615081 81 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 MIR4272-201ENST00000635924 64 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 U6.115-201ENST00000636045 103 ntBASIC1.79□□□□□ -2.12
PRAMEP78395 Y_RNA.197-201ENST00000364004 102 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 Y_RNA.252-201ENST00000364556 101 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 Y_RNA.813-201ENST00000364639 102 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 Y_RNA.509-201ENST00000384506 99 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 SNORD78.2-201ENST00000391076 69 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 Y_RNA.604-201ENST00000410574 102 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AL121890.1-201ENST00000435457 205 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RPL26P26-201ENST00000480251 434 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNU6-1170P-201ENST00000515974 106 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNU6-976P-201ENST00000516086 111 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNU1-41P-201ENST00000516161 162 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNU1-48P-201ENST00000516400 162 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 RNU7-128P-201ENST00000517247 62 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AL080274.1-201ENST00000605565 220 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AC006157.1-201ENST00000611750 366 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 AC091925.1-201ENST00000623204 462 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 U6.92-201ENST00000636464 89 ntBASIC1.78□□□□□ -2.12
PRAMEP78395 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PRAMEP78395 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PRAMEP78395 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.77□□□□□ -2.13
PRAMEP78395 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRAMEP78395 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PRAMEP78395 MIR410-201ENST00000362222 80 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 Y_RNA.39-201ENST00000362620 98 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU6-1310P-201ENST00000384153 107 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU6-360P-201ENST00000390944 104 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RPL21P1-201ENST00000399532 476 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 AC010154.1-201ENST00000425857 269 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.77□□□□□ -2.13
PRAMEP78395 UBL5P3-201ENST00000475112 231 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 AC025465.3-201ENST00000510570 311 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU7-99P-201ENST00000516271 62 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU6-911P-201ENST00000516523 104 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU6-1012P-201ENST00000516606 109 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 RNU4-77P-201ENST00000516692 156 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 AL050343.2-201ENST00000607338 280 ntBASIC1.77□□□□□ -2.13
PRAMEP78395 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms