Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC005534.2-201ENST00000431047 433 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H3AP68431 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H3AP68431 RNA5SP54-201ENST00000516951 92 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 SNORA74.3-201ENST00000517108 154 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 MTND4P33-201ENST00000556706 766 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 AC120024.3-201ENST00000603167 156 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 AL158050.2-201ENST00000605336 568 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 AC018645.2-201ENST00000609151 472 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.15□□□□□ -2.43
HIST1H3AP68431 SNORD14.1-201ENST00000365609 90 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 SNORA40.4-201ENST00000390971 128 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 RNU6-700P-201ENST00000391043 107 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AL358176.2-201ENST00000425769 204 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 ZNF114P1-201ENST00000453500 292 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 MIR3682-201ENST00000581338 84 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AC091178.2-201ENST00000584401 117 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AC010999.1-201ENST00000611856 324 ntBASIC-0.16□□□□□ -2.44
HIST1H3AP68431 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H3AP68431 SNORD114-5-201ENST00000362928 70 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 RNU4-41P-201ENST00000364426 143 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 RNU6-376P-201ENST00000384731 106 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 MIR516B2-201ENST00000385190 85 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H3AP68431 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.17□□□□□ -2.44
HIST1H3AP68431 Z98949.2-201ENST00000440996 144 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.17□□□□□ -2.44
HIST1H3AP68431 PCNPP5-201ENST00000452246 481 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 AC010598.1-201ENST00000510378 103 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 SNORA25.14-201ENST00000516481 132 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.17□□□□□ -2.44
HIST1H3AP68431 MIR1273G-201ENST00000577677 100 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 MIR4764-201ENST00000580680 88 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 AP000240.1-201ENST00000609910 452 ntBASIC-0.17□□□□□ -2.44
HIST1H3AP68431 RNU6-500P-201ENST00000362349 107 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 RNU6-606P-201ENST00000384721 111 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 SSR1P2-201ENST00000415208 787 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AL008987.1-201ENST00000415528 237 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AC098592.1-201ENST00000419352 333 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AL137161.1-201ENST00000532231 390 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 MIR548AO-201ENST00000579992 96 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AC005730.3-201ENST00000583067 366 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 SNORA25.18-201ENST00000607153 114 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AC064836.2-201ENST00000609491 462 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AL355073.2-201ENST00000612106 557 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 MIR7844-201ENST00000616161 122 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AC104260.1-201ENST00000616660 539 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 AC027279.3-201ENST00000625055 122 ntBASIC-0.18□□□□□ -2.44
HIST1H3AP68431 MIR1298-201ENST00000408783 112 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 RNU2-29P-201ENST00000410423 189 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 MTND4P18-201ENST00000447010 465 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 MTATP6P14-201ENST00000455189 673 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 RPL23AP75-201ENST00000491601 451 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AC107401.1-201ENST00000503426 685 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AC104576.1-201ENST00000524225 88 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 RPL23AP91-201ENST00000569211 455 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 MIR5583-1-201ENST00000580941 59 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AC104408.1-201ENST00000605241 170 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AC087683.2-201ENST00000611384 326 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AC090517.2-201ENST00000614966 680 ntBASIC-0.19□□□□□ -2.44
HIST1H3AP68431 AL139396.1-201ENST00000421137 167 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.2□□□□□ -2.44
HIST1H3AP68431 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 AC114811.1-201ENST00000507207 168 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 RNU6-977P-201ENST00000516411 103 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 SNORA18.7-201ENST00000516910 131 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 AC012433.1-201ENST00000588916 398 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 MIR8087-201ENST00000612745 78 ntBASIC-0.2□□□□□ -2.44
HIST1H3AP68431 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 MIR521-1-201ENST00000384902 87 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 MIR122-201ENST00000385044 85 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 AC243428.1-201ENST00000421099 264 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 AL353997.1-201ENST00000432936 108 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 MTND4LP16-201ENST00000440828 295 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 AL392103.1-201ENST00000447000 198 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 RPS3AP17-201ENST00000472594 777 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 RNU7-43P-201ENST00000516554 64 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 AC112693.2-201ENST00000556538 232 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 MIR371B-201ENST00000638082 66 ntBASIC-0.21□□□□□ -2.44
HIST1H3AP68431 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.21□□□□□ -2.44
HIST1H3AP68431 RNU6-369P-201ENST00000362515 102 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 RNU6-456P-201ENST00000384493 107 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 MIR136-201ENST00000385207 82 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms