Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1P60507 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1P60507 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1P60507 SNORA25.7-201ENST00000364375 127 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 RNU6-1082P-201ENST00000364574 107 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 MIR147B-201ENST00000390185 80 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 Y_RNA.584-201ENST00000391090 114 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 RNA5SP496-201ENST00000391240 109 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 RNU2-55P-201ENST00000411146 174 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 RN7SKP101-201ENST00000411376 320 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 AC245047.4-201ENST00000433189 144 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.22□□□□□ -1.89
ERVFC1P60507 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
ERVFC1P60507 RNU7-116P-201ENST00000516940 62 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 MIR3613-201ENST00000579844 87 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 U6.95-201ENST00000636931 70 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 AC068647.2-201ENST00000637380 353 ntBASIC3.22□□□□□ -1.89
ERVFC1P60507 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ERVFC1P60507 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ERVFC1P60507 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
ERVFC1P60507 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
ERVFC1P60507 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.21□□□□□ -1.9
ERVFC1P60507 AL391516.1-201ENST00000554380 2449 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AL136360.1-201ENST00000503377 1900 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ERVFC1P60507 RNU6-674P-201ENST00000363831 107 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 SNORD32B-201ENST00000364460 84 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ERVFC1P60507 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 HMGN2P9-201ENST00000476875 229 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 SCGB1D5P-201ENST00000515134 247 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 RNU6-1337P-201ENST00000516525 95 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 RNA5SP170-201ENST00000517150 101 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AC090142.3-201ENST00000519012 385 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AC079598.5-201ENST00000547460 117 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.21□□□□□ -1.9
ERVFC1P60507 MIR4679-2-201ENST00000578358 77 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 MIR3945-201ENST00000581853 98 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AC120024.3-201ENST00000603167 156 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 AC013412.1-201ENST00000610687 192 ntBASIC3.21□□□□□ -1.9
ERVFC1P60507 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ERVFC1P60507 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1P60507 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1P60507 Y_RNA.124-201ENST00000363339 93 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 RNU6-1305P-201ENST00000364353 104 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 SNORA51.4-201ENST00000364993 124 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 MIR518C-201ENST00000384822 101 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ERVFC1P60507 AL355796.1-201ENST00000406706 323 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 SNORA79-201ENST00000408376 140 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1P60507 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 HSPE1P18-201ENST00000517602 280 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1P60507 MIR3121-201ENST00000579680 77 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1P60507 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ERVFC1P60507 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1P60507 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1P60507 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
ERVFC1P60507 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1P60507 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
ERVFC1P60507 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 SNORA27.1-201ENST00000362604 124 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RNU6-271P-201ENST00000363858 105 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RNU6-198P-201ENST00000384258 104 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 SNORA40.5-201ENST00000391061 128 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RNA5SP184-201ENST00000411071 108 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 AL031183.1-201ENST00000457667 207 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 AC083906.5-201ENST00000503722 328 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RNU6-772P-201ENST00000516042 105 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 Y_RNA.692-201ENST00000516627 105 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 RNU6-197P-201ENST00000516680 100 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 POLR3GP1-201ENST00000594073 261 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 AL021707.8-201ENST00000609428 183 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 uc_338.14-201ENST00000613162 166 ntBASIC3.19□□□□□ -1.9
ERVFC1P60507 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
ERVFC1P60507 Y_RNA.120-201ENST00000363304 110 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 Y_RNA.309-201ENST00000365046 111 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 SNORA20B-201ENST00000384220 132 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 AL109933.2-201ENST00000452651 260 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 RNU6-437P-201ENST00000459408 95 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 RNU5E-3P-201ENST00000515913 68 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 AC005972.2-201ENST00000604690 348 ntBASIC3.18□□□□□ -1.9
ERVFC1P60507 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.18□□□□□ -1.9
ERVFC1P60507 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ERVFC1P60507 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERVFC1P60507 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERVFC1P60507 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.17□□□□□ -1.9
ERVFC1P60507 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms