Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MTND4P18-201ENST00000447010 465 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
AP3S2P59780 GMFBP1-201ENST00000467831 427 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AC114811.1-201ENST00000507207 168 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 ELOCP32-201ENST00000548625 324 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 MIR548AO-201ENST00000579992 96 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 SNORA4-201ENST00000584302 138 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AC010620.1-201ENST00000601088 1102 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AL022161.1-201ENST00000604390 213 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 MIR6718-201ENST00000616153 80 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AC078938.1-201ENST00000620993 318 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AC010487.4-201ENST00000637027 61 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.12□□□□□ -2.43
AP3S2P59780 AC073544.1-201ENST00000600110 1595 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 MTND4P12-201ENST00000498999 1377 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 RNU6-873P-201ENST00000363833 107 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 SNORD114-9-201ENST00000364370 72 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 RNU6-282P-201ENST00000365357 103 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 RNY1P14-201ENST00000384426 108 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 MIR521-1-201ENST00000384902 87 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
AP3S2P59780 MIR1298-201ENST00000408783 112 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 MIR1302-7-201ENST00000408841 72 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 RNU2-29P-201ENST00000410423 189 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 AC005534.2-201ENST00000431047 433 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 AC009961.2-201ENST00000435771 251 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 ELOCP24-201ENST00000456370 334 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 SNORA18.7-201ENST00000516910 131 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 RNA5SP54-201ENST00000516951 92 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 MIR3682-201ENST00000581338 84 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 AC023932.2-201ENST00000603176 175 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 AC022709.1-201ENST00000615967 87 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 AC006435.5-201ENST00000624486 112 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 MIR371B-201ENST00000638082 66 ntBASIC-0.13□□□□□ -2.43
AP3S2P59780 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.13□□□□□ -2.43
AP3S2P59780 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 SNORD113-6-201ENST00000363345 75 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 SNORA42.1-201ENST00000363515 137 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.14□□□□□ -2.43
AP3S2P59780 MIR513B-201ENST00000385136 84 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 RNU6-903P-201ENST00000391270 109 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
AP3S2P59780 AC015818.7-201ENST00000428754 109 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.14□□□□□ -2.43
AP3S2P59780 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.14□□□□□ -2.43
AP3S2P59780 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.14□□□□□ -2.43
AP3S2P59780 AC087499.7-201ENST00000441958 109 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 PCNPP5-201ENST00000452246 481 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 AC091179.3-201ENST00000474761 144 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.14□□□□□ -2.43
AP3S2P59780 AC091885.1-201ENST00000506658 268 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 AC010598.1-201ENST00000510378 103 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 RNU4-77P-201ENST00000516692 156 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 RNU11-2P-201ENST00000516898 142 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 SCOCP1-201ENST00000554676 349 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.14□□□□□ -2.43
AP3S2P59780 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.14□□□□□ -2.43
AP3S2P59780 TUSC7.1-201ENST00000610969 165 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.14□□□□□ -2.43
AP3S2P59780 SNORD68-201ENST00000363214 84 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 RNU6-407P-201ENST00000365280 104 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 AL049545.1-201ENST00000401856 572 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 AL392103.1-201ENST00000447000 198 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 snoU13.21-201ENST00000459368 105 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 AC018710.1-201ENST00000506509 158 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 RNU6-863P-201ENST00000515989 104 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 AC091144.1-201ENST00000519573 138 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP3S2P59780 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP3S2P59780 AL355073.2-201ENST00000612106 557 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.15□□□□□ -2.43
AP3S2P59780 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 SNORA20B-201ENST00000384220 132 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 MIR598-201ENST00000384868 97 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 MIR1287-201ENST00000408492 90 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 RNU6-325P-201ENST00000411132 105 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.16□□□□□ -2.44
AP3S2P59780 AC018865.2-201ENST00000423631 129 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 RPS3AP17-201ENST00000472594 777 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 RNU6-977P-201ENST00000516411 103 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 AP002963.1-201ENST00000530590 184 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.16□□□□□ -2.44
AP3S2P59780 AC104408.1-201ENST00000605241 170 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 AC027279.3-201ENST00000625055 122 ntBASIC-0.16□□□□□ -2.44
AP3S2P59780 RNU6-784P-201ENST00000384330 106 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 AL390729.2-201ENST00000416137 156 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 AC243428.1-201ENST00000421099 264 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 MRPS10P2-201ENST00000431226 381 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 Z82188.1-201ENST00000436709 154 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 AL359672.1-201ENST00000442302 409 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.17□□□□□ -2.44
AP3S2P59780 snoU13.18-201ENST00000459483 104 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 CCDC34P1-201ENST00000507441 517 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 SNORA14.1-201ENST00000516113 141 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 RNU6-107P-201ENST00000516643 102 ntBASIC-0.17□□□□□ -2.44
AP3S2P59780 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms