Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.58□□□□□ -2.16
RIPK4P57078 RPL17P51-201ENST00000605218 238 ntBASIC1.58□□□□□ -2.16
RIPK4P57078 AC040896.1-201ENST00000613819 479 ntBASIC1.58□□□□□ -2.16
RIPK4P57078 AC133104.2-201ENST00000615272 193 ntBASIC1.58□□□□□ -2.16
RIPK4P57078 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.58□□□□□ -2.16
RIPK4P57078 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.58□□□□□ -2.16
RIPK4P57078 U3.9-201ENST00000363823 204 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR10B-201ENST00000385011 110 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RIPK4P57078 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR208B-201ENST00000401172 77 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR1302-11-201ENST00000408051 138 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR1302-9-201ENST00000408365 138 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR1302-10-201ENST00000408734 138 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MTCYBP10-201ENST00000424905 650 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 RNU7-87P-201ENST00000459343 62 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 RNU6-307P-201ENST00000516743 106 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 SNORD116.3-201ENST00000517176 78 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
RIPK4P57078 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 AC104695.3-201ENST00000604052 296 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR1302-2-201ENST00000607096 138 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 MIR4272-201ENST00000635924 64 ntBASIC1.57□□□□□ -2.16
RIPK4P57078 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
RIPK4P57078 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.56□□□□□ -2.16
RIPK4P57078 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
RIPK4P57078 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RIPK4P57078 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 Y_RNA.428-201ENST00000384078 102 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 RNU6-318P-201ENST00000384283 103 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 RNU6-700P-201ENST00000391043 107 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 RNU6-159P-201ENST00000391080 106 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 Y_RNA.592-201ENST00000410274 109 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AC123900.1-201ENST00000420390 96 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 EIF1P2-201ENST00000428233 350 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AC007215.1-201ENST00000464893 276 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AP005660.1-201ENST00000522972 293 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.56□□□□□ -2.16
RIPK4P57078 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.56□□□□□ -2.16
RIPK4P57078 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
RIPK4P57078 MIR5188-201ENST00000583467 113 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 MIR4781-201ENST00000585250 76 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 AC100812.1-201ENST00000607622 580 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
RIPK4P57078 ZNF204P-201ENST00000416749 2397 ntBASIC1.56□□□□□ -2.16
RIPK4P57078 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
RIPK4P57078 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 RNA5SP361-201ENST00000362686 118 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 SNORD115-8-201ENST00000363856 82 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 SNORD114-6-201ENST00000364393 72 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 SNORD115-38-201ENST00000365037 82 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 Y_RNA.319-201ENST00000365138 92 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 SNORA33.2-201ENST00000365413 134 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 Y_RNA.364-201ENST00000365532 101 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 RNU6-281P-201ENST00000384212 103 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 RPS26P42-201ENST00000413485 326 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AC113618.1-201ENST00000416747 285 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AC015922.2-201ENST00000435593 184 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.55□□□□□ -2.16
RIPK4P57078 MTCO3P8-201ENST00000453691 755 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 Y_RNA.706-201ENST00000516933 99 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.55□□□□□ -2.16
RIPK4P57078 AC008269.2-201ENST00000561915 1105 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.55□□□□□ -2.16
RIPK4P57078 AC125232.2-201ENST00000592457 143 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AC016925.2-201ENST00000605108 242 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 AL606534.2-204ENST00000635008 178 ntBASIC1.55□□□□□ -2.16
RIPK4P57078 RNU1-76P-201ENST00000362903 159 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 RNU6-23P-201ENST00000363283 107 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 RNU6-873P-201ENST00000363833 107 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 SNORA63C-201ENST00000364578 129 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 RNU1-115P-201ENST00000365329 160 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 SNORA18.2-201ENST00000383865 132 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 MIR153-2-201ENST00000385225 87 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPK4P57078 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPK4P57078 AC010469.2-201ENST00000496412 480 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 ATP5EP1-201ENST00000510257 156 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 RNU6-1098P-201ENST00000516772 96 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPK4P57078 AC090617.3-201ENST00000573670 475 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC005786.1-201ENST00000588553 154 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 MZT1P2-201ENST00000604387 248 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC083806.3-201ENST00000614016 455 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AL357075.2-201ENST00000614906 189 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 AC091895.1-201ENST00000624494 256 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 BX322639.1-202ENST00000423987 2213 ntBASIC1.54□□□□□ -2.16
RIPK4P57078 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms