Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PER3P56645 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PER3P56645 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PER3P56645 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PER3P56645 RNU6-1272P-201ENST00000362776 107 ntBASIC2.63□□□□□ -1.99
PER3P56645 Y_RNA.172-201ENST00000363765 102 ntBASIC2.63□□□□□ -1.99
PER3P56645 Y_RNA.297-201ENST00000364950 91 ntBASIC2.63□□□□□ -1.99
PER3P56645 Y_RNA.785-201ENST00000384290 109 ntBASIC2.63□□□□□ -1.99
PER3P56645 MTND5P15-201ENST00000434246 349 ntBASIC2.63□□□□□ -1.99
PER3P56645 AC074290.1-201ENST00000448883 135 ntBASIC2.63□□□□□ -1.99
PER3P56645 PRELID3BP1-201ENST00000457142 540 ntBASIC2.63□□□□□ -1.99
PER3P56645 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.63□□□□□ -1.99
PER3P56645 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.63□□□□□ -1.99
PER3P56645 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.63□□□□□ -1.99
PER3P56645 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.63□□□□□ -1.99
PER3P56645 AL008718.3-201ENST00000610217 321 ntBASIC2.63□□□□□ -1.99
PER3P56645 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.63□□□□□ -1.99
PER3P56645 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.63□□□□□ -1.99
PER3P56645 AC009487.4-201ENST00000624969 3585 ntBASIC2.63□□□□□ -1.99
PER3P56645 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
PER3P56645 AC068700.1-201ENST00000565862 3754 ntBASIC2.62□□□□□ -1.99
PER3P56645 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PER3P56645 Y_RNA.199-201ENST00000364014 102 ntBASIC2.62□□□□□ -1.99
PER3P56645 RNU6-211P-201ENST00000384047 107 ntBASIC2.62□□□□□ -1.99
PER3P56645 SNORA70B-201ENST00000384210 135 ntBASIC2.62□□□□□ -1.99
PER3P56645 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.62□□□□□ -1.99
PER3P56645 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
PER3P56645 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.62□□□□□ -1.99
PER3P56645 AL357134.1-201ENST00000445848 426 ntBASIC2.62□□□□□ -1.99
PER3P56645 RN7SL297P-201ENST00000483161 293 ntBASIC2.62□□□□□ -1.99
PER3P56645 RN7SL20P-201ENST00000488827 297 ntBASIC2.62□□□□□ -1.99
PER3P56645 NDUFA5P6-201ENST00000542110 379 ntBASIC2.62□□□□□ -1.99
PER3P56645 AC091544.4-201ENST00000555268 342 ntBASIC2.62□□□□□ -1.99
PER3P56645 MIR3684-201ENST00000579779 74 ntBASIC2.62□□□□□ -1.99
PER3P56645 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
PER3P56645 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.61□□□□□ -1.99
PER3P56645 SNORD114-7-201ENST00000362520 77 ntBASIC2.61□□□□□ -1.99
PER3P56645 SNORA27.1-201ENST00000362604 124 ntBASIC2.61□□□□□ -1.99
PER3P56645 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
PER3P56645 Y_RNA.83-201ENST00000363005 113 ntBASIC2.61□□□□□ -1.99
PER3P56645 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PER3P56645 RNU6-763P-201ENST00000390865 106 ntBASIC2.61□□□□□ -1.99
PER3P56645 RNU6-1248P-201ENST00000391096 64 ntBASIC2.61□□□□□ -1.99
PER3P56645 SNORA26.5-201ENST00000391215 123 ntBASIC2.61□□□□□ -1.99
PER3P56645 RPL23AP7-203ENST00000449021 469 ntBASIC2.61□□□□□ -1.99
PER3P56645 SNORD109B-201ENST00000458961 67 ntBASIC2.61□□□□□ -1.99
PER3P56645 SNORD109A-201ENST00000459128 67 ntBASIC2.61□□□□□ -1.99
PER3P56645 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.61□□□□□ -1.99
PER3P56645 AC010598.1-201ENST00000510378 103 ntBASIC2.61□□□□□ -1.99
PER3P56645 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
PER3P56645 Y_RNA.679-201ENST00000516416 91 ntBASIC2.61□□□□□ -1.99
PER3P56645 RNU2-34P-201ENST00000516534 121 ntBASIC2.61□□□□□ -1.99
PER3P56645 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
PER3P56645 AC136628.3-201ENST00000521868 290 ntBASIC2.61□□□□□ -1.99
PER3P56645 AC087441.2-201ENST00000529141 262 ntBASIC2.61□□□□□ -1.99
PER3P56645 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.61□□□□□ -1.99
PER3P56645 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
PER3P56645 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
PER3P56645 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
PER3P56645 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
PER3P56645 U4atac.1-201ENST00000618345 95 ntBASIC2.61□□□□□ -1.99
PER3P56645 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.6□□□□□ -1.99
PER3P56645 MIR411-201ENST00000362239 96 ntBASIC2.6□□□□□ -1.99
PER3P56645 Y_RNA.310-201ENST00000365063 113 ntBASIC2.6□□□□□ -1.99
PER3P56645 Y_RNA.368-201ENST00000365547 113 ntBASIC2.6□□□□□ -1.99
PER3P56645 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
PER3P56645 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
PER3P56645 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
PER3P56645 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
PER3P56645 RNU6-710P-201ENST00000410424 105 ntBASIC2.6□□□□□ -1.99
PER3P56645 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.6□□□□□ -1.99
PER3P56645 AC024067.1-201ENST00000426199 223 ntBASIC2.6□□□□□ -1.99
PER3P56645 BTF3P11-201ENST00000426582 477 ntBASIC2.6□□□□□ -1.99
PER3P56645 SUMO1P2-201ENST00000452524 304 ntBASIC2.6□□□□□ -1.99
PER3P56645 U8.19-201ENST00000459095 133 ntBASIC2.6□□□□□ -1.99
PER3P56645 COX6CP14-201ENST00000469580 174 ntBASIC2.6□□□□□ -1.99
PER3P56645 RN7SL633P-201ENST00000488974 297 ntBASIC2.6□□□□□ -1.99
PER3P56645 RNU6-237P-201ENST00000515985 71 ntBASIC2.6□□□□□ -1.99
PER3P56645 Y_RNA.700-201ENST00000516806 100 ntBASIC2.6□□□□□ -1.99
PER3P56645 SNORA81.3-201ENST00000517283 198 ntBASIC2.6□□□□□ -1.99
PER3P56645 CBX3P4-201ENST00000538909 354 ntBASIC2.6□□□□□ -1.99
PER3P56645 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.6□□□□□ -1.99
PER3P56645 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
PER3P56645 AC073349.3-201ENST00000617616 186 ntBASIC2.6□□□□□ -1.99
PER3P56645 AC007318.2-201ENST00000620999 243 ntBASIC2.6□□□□□ -1.99
PER3P56645 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
PER3P56645 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PER3P56645 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PER3P56645 AC073325.2-201ENST00000339545 159 ntBASIC2.59□□□□□ -1.99
PER3P56645 RNU6-1048P-201ENST00000364054 107 ntBASIC2.59□□□□□ -1.99
PER3P56645 MIR548I3-201ENST00000408378 149 ntBASIC2.59□□□□□ -1.99
PER3P56645 MIR548I1-201ENST00000408810 149 ntBASIC2.59□□□□□ -1.99
PER3P56645 AC009238.1-201ENST00000442165 424 ntBASIC2.59□□□□□ -1.99
PER3P56645 AC009237.6-201ENST00000446969 424 ntBASIC2.59□□□□□ -1.99
PER3P56645 RNU6-856P-201ENST00000516959 98 ntBASIC2.59□□□□□ -1.99
PER3P56645 AC027419.1-201ENST00000522976 328 ntBASIC2.59□□□□□ -1.99
PER3P56645 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.59□□□□□ -1.99
PER3P56645 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.15-201ENST00000611544 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.16-201ENST00000613119 191 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms