Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTND5P6-201ENST00000422338 1798 ntBASIC2.09□□□□□ -2.07
CDH12P55289 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CDH12P55289 MIR335-201ENST00000362173 94 ntBASIC2.09□□□□□ -2.07
CDH12P55289 Y_RNA.14-201ENST00000362415 103 ntBASIC2.09□□□□□ -2.07
CDH12P55289 RNU6-1164P-201ENST00000364428 107 ntBASIC2.09□□□□□ -2.07
CDH12P55289 Y_RNA.329-201ENST00000365209 107 ntBASIC2.09□□□□□ -2.07
CDH12P55289 Y_RNA.361-201ENST00000365515 120 ntBASIC2.09□□□□□ -2.07
CDH12P55289 Y_RNA.562-201ENST00000384695 113 ntBASIC2.09□□□□□ -2.07
CDH12P55289 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
CDH12P55289 AL031003.1-201ENST00000404229 172 ntBASIC2.09□□□□□ -2.07
CDH12P55289 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
CDH12P55289 SNORD65B-201ENST00000459126 73 ntBASIC2.09□□□□□ -2.07
CDH12P55289 AP001486.1-201ENST00000463339 476 ntBASIC2.09□□□□□ -2.07
CDH12P55289 RN7SL636P-201ENST00000497504 294 ntBASIC2.09□□□□□ -2.07
CDH12P55289 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
CDH12P55289 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
CDH12P55289 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
CDH12P55289 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH12P55289 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
CDH12P55289 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
CDH12P55289 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
CDH12P55289 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDH12P55289 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDH12P55289 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDH12P55289 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CDH12P55289 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH12P55289 Y_RNA.136-201ENST00000363444 102 ntBASIC2.08□□□□□ -2.08
CDH12P55289 RNU6-324P-201ENST00000363957 106 ntBASIC2.08□□□□□ -2.08
CDH12P55289 RNU6-326P-201ENST00000365480 107 ntBASIC2.08□□□□□ -2.08
CDH12P55289 SNORA20B-201ENST00000384220 132 ntBASIC2.08□□□□□ -2.08
CDH12P55289 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH12P55289 MTCO1P5-201ENST00000433573 344 ntBASIC2.08□□□□□ -2.08
CDH12P55289 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
CDH12P55289 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH12P55289 SERF1AP1-201ENST00000514575 187 ntBASIC2.08□□□□□ -2.08
CDH12P55289 RNU2-31P-201ENST00000516954 155 ntBASIC2.08□□□□□ -2.08
CDH12P55289 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
CDH12P55289 AC026271.5-201ENST00000577873 130 ntBASIC2.08□□□□□ -2.08
CDH12P55289 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
CDH12P55289 AC006006.1-201ENST00000603082 144 ntBASIC2.08□□□□□ -2.08
CDH12P55289 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH12P55289 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
CDH12P55289 CTSLP2-204ENST00000629029 392 ntBASIC2.08□□□□□ -2.08
CDH12P55289 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH12P55289 SNORD115-3-201ENST00000363100 82 ntBASIC2.07□□□□□ -2.08
CDH12P55289 RNU4-80P-201ENST00000363200 141 ntBASIC2.07□□□□□ -2.08
CDH12P55289 Y_RNA.124-201ENST00000363339 93 ntBASIC2.07□□□□□ -2.08
CDH12P55289 Y_RNA.350-201ENST00000365409 98 ntBASIC2.07□□□□□ -2.08
CDH12P55289 Y_RNA.447-201ENST00000384184 113 ntBASIC2.07□□□□□ -2.08
CDH12P55289 RN7SKP284-201ENST00000411002 343 ntBASIC2.07□□□□□ -2.08
CDH12P55289 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH12P55289 AC027419.1-201ENST00000522976 328 ntBASIC2.07□□□□□ -2.08
CDH12P55289 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH12P55289 AL031274.2-201ENST00000599419 203 ntBASIC2.07□□□□□ -2.08
CDH12P55289 AC010900.2-201ENST00000604508 210 ntBASIC2.07□□□□□ -2.08
CDH12P55289 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
CDH12P55289 AC245884.12-201ENST00000615364 59 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
CDH12P55289 MIR203B-201ENST00000636080 86 ntBASIC2.07□□□□□ -2.08
CDH12P55289 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH12P55289 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH12P55289 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CDH12P55289 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH12P55289 RNU6-525P-201ENST00000363685 104 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RNU6-1240P-201ENST00000365155 104 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
CDH12P55289 Y_RNA.477-201ENST00000384352 108 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RNU6-160P-201ENST00000384591 107 ntBASIC2.06□□□□□ -2.08
CDH12P55289 SNORA53-201ENST00000391141 249 ntBASIC2.06□□□□□ -2.08
CDH12P55289 AC008134.1-201ENST00000420943 193 ntBASIC2.06□□□□□ -2.08
CDH12P55289 AL121890.1-201ENST00000435457 205 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RNU1-131P-201ENST00000458943 161 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RPL39P38-201ENST00000467018 153 ntBASIC2.06□□□□□ -2.08
CDH12P55289 AC010598.1-201ENST00000510378 103 ntBASIC2.06□□□□□ -2.08
CDH12P55289 RPL21P9-201ENST00000556149 474 ntBASIC2.06□□□□□ -2.08
CDH12P55289 AC110588.1-201ENST00000559699 137 ntBASIC2.06□□□□□ -2.08
CDH12P55289 MIR3684-201ENST00000579779 74 ntBASIC2.06□□□□□ -2.08
CDH12P55289 AL159152.1-201ENST00000635019 2587 ntBASIC2.06□□□□□ -2.08
CDH12P55289 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH12P55289 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH12P55289 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH12P55289 SNORA27.1-201ENST00000362604 124 ntBASIC2.05□□□□□ -2.08
CDH12P55289 Y_RNA.188-201ENST00000363952 111 ntBASIC2.05□□□□□ -2.08
CDH12P55289 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
CDH12P55289 NDUFB4P4-201ENST00000404822 243 ntBASIC2.05□□□□□ -2.08
CDH12P55289 Y_RNA.618-201ENST00000410949 107 ntBASIC2.05□□□□□ -2.08
CDH12P55289 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH12P55289 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms