Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 Y_RNA.451-201ENST00000384200 100 ntBASIC1.01□□□□□ -2.25
CDH4P55283 Y_RNA.524-201ENST00000384564 100 ntBASIC1.01□□□□□ -2.25
CDH4P55283 Y_RNA.561-201ENST00000384694 100 ntBASIC1.01□□□□□ -2.25
CDH4P55283 Y_RNA.573-201ENST00000384763 105 ntBASIC1.01□□□□□ -2.25
CDH4P55283 MIR548F1-201ENST00000408667 84 ntBASIC1.01□□□□□ -2.25
CDH4P55283 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
CDH4P55283 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH4P55283 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH4P55283 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
CDH4P55283 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
CDH4P55283 ZNF299P-201ENST00000406845 1804 ntBASIC1.01□□□□□ -2.25
CDH4P55283 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDH4P55283 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CDH4P55283 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CDH4P55283 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-1266P-201ENST00000362794 105 ntBASIC1□□□□□ -2.25
CDH4P55283 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
CDH4P55283 Y_RNA.453-201ENST00000384223 109 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-793P-201ENST00000384233 104 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-1215P-201ENST00000384441 102 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-541P-201ENST00000384709 110 ntBASIC1□□□□□ -2.25
CDH4P55283 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDH4P55283 SNORA12.1-201ENST00000390873 148 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-440P-201ENST00000390882 105 ntBASIC1□□□□□ -2.25
CDH4P55283 MRPL42P3-201ENST00000401492 326 ntBASIC1□□□□□ -2.25
CDH4P55283 AC009161.1-201ENST00000417306 376 ntBASIC1□□□□□ -2.25
CDH4P55283 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
CDH4P55283 SNORD5.1-201ENST00000458800 75 ntBASIC1□□□□□ -2.25
CDH4P55283 AC092991.1-201ENST00000477176 376 ntBASIC1□□□□□ -2.25
CDH4P55283 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1□□□□□ -2.25
CDH4P55283 AC093303.1-201ENST00000514549 295 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU4-49P-201ENST00000516080 140 ntBASIC1□□□□□ -2.25
CDH4P55283 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
CDH4P55283 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
CDH4P55283 AC134698.4-201ENST00000523451 826 ntBASIC1□□□□□ -2.25
CDH4P55283 AL590705.4-201ENST00000532209 134 ntBASIC1□□□□□ -2.25
CDH4P55283 AL137100.2-201ENST00000555786 315 ntBASIC1□□□□□ -2.25
CDH4P55283 MIR4273-201ENST00000582824 84 ntBASIC1□□□□□ -2.25
CDH4P55283 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
CDH4P55283 AC106754.2-201ENST00000623006 233 ntBASIC1□□□□□ -2.25
CDH4P55283 SNORD3E-202ENST00000627253 216 ntBASIC1□□□□□ -2.25
CDH4P55283 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
CDH4P55283 Y_RNA.179-201ENST00000363844 90 ntBASIC0.99□□□□□ -2.25
CDH4P55283 RNU6-280P-201ENST00000364145 104 ntBASIC0.99□□□□□ -2.25
CDH4P55283 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDH4P55283 AL034345.1-201ENST00000407768 123 ntBASIC0.99□□□□□ -2.25
CDH4P55283 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH4P55283 MTND3P23-201ENST00000431980 347 ntBASIC0.99□□□□□ -2.25
CDH4P55283 MTND4LP16-201ENST00000440828 295 ntBASIC0.99□□□□□ -2.25
CDH4P55283 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH4P55283 AC092989.1-201ENST00000481235 277 ntBASIC0.99□□□□□ -2.25
CDH4P55283 AC011352.1-201ENST00000512300 793 ntBASIC0.99□□□□□ -2.25
CDH4P55283 RNU7-175P-201ENST00000515915 61 ntBASIC0.99□□□□□ -2.25
CDH4P55283 SNORA70.22-201ENST00000517160 124 ntBASIC0.99□□□□□ -2.25
CDH4P55283 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH4P55283 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
CDH4P55283 MIR6128-201ENST00000615528 109 ntBASIC0.99□□□□□ -2.25
CDH4P55283 U6.73-201ENST00000619194 103 ntBASIC0.99□□□□□ -2.25
CDH4P55283 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDH4P55283 RNU6-1013P-201ENST00000384180 107 ntBASIC0.98□□□□□ -2.25
CDH4P55283 RNU6-281P-201ENST00000384212 103 ntBASIC0.98□□□□□ -2.25
CDH4P55283 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
CDH4P55283 RNU1-139P-201ENST00000391307 165 ntBASIC0.98□□□□□ -2.25
CDH4P55283 MIR1287-201ENST00000408492 90 ntBASIC0.98□□□□□ -2.25
CDH4P55283 MTND4P18-201ENST00000447010 465 ntBASIC0.98□□□□□ -2.25
CDH4P55283 RNU6-329P-201ENST00000459618 107 ntBASIC0.98□□□□□ -2.25
CDH4P55283 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CDH4P55283 MTND5P5-201ENST00000503764 376 ntBASIC0.98□□□□□ -2.25
CDH4P55283 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
CDH4P55283 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
CDH4P55283 RNU1-54P-201ENST00000517181 120 ntBASIC0.98□□□□□ -2.25
CDH4P55283 AC091144.1-201ENST00000519573 138 ntBASIC0.98□□□□□ -2.25
CDH4P55283 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.98□□□□□ -2.25
CDH4P55283 CBX3P8-201ENST00000532412 525 ntBASIC0.98□□□□□ -2.25
CDH4P55283 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.98□□□□□ -2.25
CDH4P55283 MIR5701-3-201ENST00000578890 82 ntBASIC0.98□□□□□ -2.25
CDH4P55283 MIR5701-1-201ENST00000585138 82 ntBASIC0.98□□□□□ -2.25
CDH4P55283 AC022432.1-201ENST00000595739 310 ntBASIC0.98□□□□□ -2.25
CDH4P55283 MIR5701-2-201ENST00000615634 82 ntBASIC0.98□□□□□ -2.25
CDH4P55283 RNU6-222P-201ENST00000362438 107 ntBASIC0.97□□□□□ -2.25
CDH4P55283 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
CDH4P55283 Y_RNA.490-201ENST00000384413 102 ntBASIC0.97□□□□□ -2.25
CDH4P55283 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC026782.1-201ENST00000512952 449 ntBASIC0.97□□□□□ -2.25
CDH4P55283 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
CDH4P55283 RNU6-718P-201ENST00000516166 105 ntBASIC0.97□□□□□ -2.25
CDH4P55283 RNU6-113P-201ENST00000516653 101 ntBASIC0.97□□□□□ -2.25
CDH4P55283 MIR4790-201ENST00000577799 79 ntBASIC0.97□□□□□ -2.25
CDH4P55283 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC018638.8-201ENST00000588755 281 ntBASIC0.97□□□□□ -2.25
CDH4P55283 7SK.7-201ENST00000603504 247 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC136443.5-201ENST00000603741 370 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC010999.1-201ENST00000611856 324 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC073349.3-201ENST00000617616 186 ntBASIC0.97□□□□□ -2.25
CDH4P55283 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
CDH4P55283 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
CDH4P55283 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
CDH4P55283 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
CDH4P55283 Y_RNA.473-201ENST00000384333 102 ntBASIC0.96□□□□□ -2.26
CDH4P55283 RNU6-505P-201ENST00000384427 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms