Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU6-57P-201ENST00000411348 103 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-498P-201ENST00000459468 107 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU7-57P-201ENST00000459540 60 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 Y_RNA.661-201ENST00000516003 99 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-976P-201ENST00000516086 111 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-856P-201ENST00000516959 98 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.42□□□□□ -2.18
EFNA3P52797 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
EFNA3P52797 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.42□□□□□ -2.18
EFNA3P52797 C8orf59P2-201ENST00000603441 271 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AL133255.1-201ENST00000606374 441 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AC090574.1-201ENST00000623186 233 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 AC008873.1-201ENST00000625051 138 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
EFNA3P52797 MTND4P29-201ENST00000503122 1372 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
EFNA3P52797 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
EFNA3P52797 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
EFNA3P52797 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
EFNA3P52797 Y_RNA.61-201ENST00000362835 102 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 Y_RNA.460-201ENST00000384255 102 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 Y_RNA.579-201ENST00000390939 94 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 Y_RNA.592-201ENST00000410274 109 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 RNA5SP247-201ENST00000411181 105 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AF228730.4-201ENST00000421457 183 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 MTND4P28-201ENST00000426217 387 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.41□□□□□ -2.18
EFNA3P52797 RNU7-169P-201ENST00000459456 61 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AC067942.3-201ENST00000512025 362 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AC011406.1-201ENST00000512440 370 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 RNU6-107P-201ENST00000516643 102 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
EFNA3P52797 MZT1P2-201ENST00000604387 248 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 AC069114.2-201ENST00000604699 304 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.41□□□□□ -2.18
EFNA3P52797 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
EFNA3P52797 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
EFNA3P52797 SNORA33-201ENST00000363664 130 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 U3.8-201ENST00000363675 217 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 SNORD87-201ENST00000364849 89 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 Y_RNA.415-201ENST00000384012 112 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 Y_RNA.463-201ENST00000384271 102 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 Y_RNA.509-201ENST00000384506 99 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
EFNA3P52797 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 RNU6-1001P-201ENST00000411265 100 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.4□□□□□ -2.19
EFNA3P52797 MRPS18CP6-201ENST00000423587 223 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 UQCRBP2-201ENST00000447827 297 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 NDUFB4P10-201ENST00000452541 359 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 AC005908.1-201ENST00000468701 347 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.4□□□□□ -2.19
EFNA3P52797 AC125232.2-201ENST00000592457 143 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 AC010900.2-201ENST00000604508 210 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 AC087588.2-201ENST00000617667 426 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 AC090971.5-201ENST00000621102 293 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 snoZ196.1-201ENST00000625269 89 ntBASIC1.4□□□□□ -2.19
EFNA3P52797 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.4□□□□□ -2.19
EFNA3P52797 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
EFNA3P52797 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.39□□□□□ -2.19
EFNA3P52797 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 Y_RNA.39-201ENST00000362620 98 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 Y_RNA.197-201ENST00000364004 102 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 SNORA67.2-201ENST00000384300 149 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
EFNA3P52797 AL117342.1-201ENST00000404861 406 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 RNA5SP504-201ENST00000410676 117 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.39□□□□□ -2.19
EFNA3P52797 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.39□□□□□ -2.19
EFNA3P52797 U8.22-201ENST00000459141 133 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 AC005840.1-201ENST00000498412 377 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 HMGN1P13-201ENST00000505795 138 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 RN7SKP49-201ENST00000516675 260 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 RNA5SP437-201ENST00000517249 129 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 AC023442.1-201ENST00000531247 422 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 AL138825.1-201ENST00000618587 192 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 U2.1-201ENST00000618978 145 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.39□□□□□ -2.19
EFNA3P52797 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
EFNA3P52797 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
EFNA3P52797 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
EFNA3P52797 RNU6-1115P-201ENST00000362490 106 ntBASIC1.38□□□□□ -2.19
EFNA3P52797 RNA5SP361-201ENST00000362686 118 ntBASIC1.38□□□□□ -2.19
EFNA3P52797 RNU6-1266P-201ENST00000362794 105 ntBASIC1.38□□□□□ -2.19
EFNA3P52797 Y_RNA.419-201ENST00000384041 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms