Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 RNU6-756P-201ENST00000383997 107 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC098592.1-201ENST00000419352 333 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC015818.7-201ENST00000428754 109 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC087499.7-201ENST00000441958 109 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.41□□□□□ -2.48
GTF2A1P52655 RNU7-56P-201ENST00000458744 62 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC091951.3-201ENST00000504093 246 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 SNORA18.7-201ENST00000516910 131 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 RPL21P9-201ENST00000556149 474 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC012433.1-201ENST00000588916 398 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 AC087683.1-201ENST00000591187 441 ntBASIC-0.41□□□□□ -2.48
GTF2A1P52655 RNA5SP325-201ENST00000363756 130 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 RNU4-92P-201ENST00000363783 136 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 RNU6-580P-201ENST00000365159 107 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 RNU6-245P-201ENST00000384020 107 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 MIR643-201ENST00000385267 97 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 MIR548H2-201ENST00000408874 88 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 AL606489.2-201ENST00000433886 234 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 AC079781.2-201ENST00000446424 169 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.42□□□□□ -2.48
GTF2A1P52655 FGF7P1-201ENST00000582820 288 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 MIR4743-201ENST00000584576 69 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 AC005771.1-201ENST00000585581 349 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 MIR4251-201ENST00000635819 61 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 AC099654.13-201ENST00000639774 207 ntBASIC-0.42□□□□□ -2.48
GTF2A1P52655 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
GTF2A1P52655 SNORA36.1-201ENST00000363424 132 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 RNU6-934P-201ENST00000365154 107 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MIR136-201ENST00000385207 82 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MIR214-201ENST00000385214 110 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MTCO2P21-201ENST00000419780 677 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 AC243428.1-201ENST00000421099 264 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MTND3P9-201ENST00000429526 346 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.43□□□□□ -2.48
GTF2A1P52655 AC016550.1-201ENST00000505348 785 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 AC010598.1-201ENST00000510378 103 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 RNA5SP330-201ENST00000517096 96 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MTND2P38-201ENST00000522536 667 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 AL358944.1-201ENST00000528537 144 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MIR4771-2-201ENST00000577758 74 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MIR4771-1-201ENST00000582617 74 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 AC098679.4-201ENST00000624241 654 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MTND4P9-201ENST00000507819 1346 ntBASIC-0.43□□□□□ -2.48
GTF2A1P52655 MIR377-201ENST00000362145 69 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 AC117470.1-201ENST00000381974 330 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 RNU6-157P-201ENST00000383957 107 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 MIR15B-201ENST00000385045 98 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 SNORD73A-201ENST00000386062 65 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 MIR454-201ENST00000390180 115 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 RNA5SP127-201ENST00000411051 133 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 PDCL2P1-201ENST00000419302 352 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.44□□□□□ -2.48
GTF2A1P52655 HMGN1P10-201ENST00000474557 553 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.44□□□□□ -2.48
GTF2A1P52655 SNORD27.1-201ENST00000516319 72 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 RNA5SP268-201ENST00000516828 124 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 MIR4676-201ENST00000583078 72 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 AL607023.1-201ENST00000620045 248 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 AC009878.1-201ENST00000621819 340 ntBASIC-0.44□□□□□ -2.48
GTF2A1P52655 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 SNORD45.3-201ENST00000363836 72 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 RNU4-68P-201ENST00000364314 141 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 RNU6-74P-201ENST00000384235 107 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.45□□□□□ -2.48
GTF2A1P52655 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.45□□□□□ -2.48
GTF2A1P52655 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.45□□□□□ -2.48
GTF2A1P52655 AC104850.1-201ENST00000435940 476 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 SNORD123-201ENST00000459473 70 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 RNU6-410P-201ENST00000517006 107 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AC005730.3-201ENST00000583067 366 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AC020891.4-201ENST00000605745 93 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AL158211.2-201ENST00000607282 395 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AC091304.9-201ENST00000612091 226 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.45□□□□□ -2.48
GTF2A1P52655 AL357075.2-201ENST00000614906 189 ntBASIC-0.45□□□□□ -2.48
GTF2A1P52655 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 RNU6-747P-201ENST00000390928 104 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 1339.6 ms