Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MRPS10P1-201ENST00000448483 130 ntBASIC2.24□□□□□ -2.05
NEK3P51956 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
NEK3P51956 AC010409.1-201ENST00000487382 476 ntBASIC2.24□□□□□ -2.05
NEK3P51956 AC010469.2-201ENST00000496412 480 ntBASIC2.24□□□□□ -2.05
NEK3P51956 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.24□□□□□ -2.05
NEK3P51956 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
NEK3P51956 AC005176.2-201ENST00000596933 147 ntBASIC2.24□□□□□ -2.05
NEK3P51956 AL390123.1-201ENST00000603216 237 ntBASIC2.24□□□□□ -2.05
NEK3P51956 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
NEK3P51956 U6.115-201ENST00000636045 103 ntBASIC2.24□□□□□ -2.05
NEK3P51956 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NEK3P51956 RNU6-661P-201ENST00000362409 107 ntBASIC2.23□□□□□ -2.05
NEK3P51956 SNORA63.7-201ENST00000365579 123 ntBASIC2.23□□□□□ -2.05
NEK3P51956 SNORD14.1-201ENST00000365609 90 ntBASIC2.23□□□□□ -2.05
NEK3P51956 Y_RNA.462-201ENST00000384268 102 ntBASIC2.23□□□□□ -2.05
NEK3P51956 MIR548P-201ENST00000408336 84 ntBASIC2.23□□□□□ -2.05
NEK3P51956 AL121890.1-201ENST00000435457 205 ntBASIC2.23□□□□□ -2.05
NEK3P51956 RNU7-94P-201ENST00000459576 63 ntBASIC2.23□□□□□ -2.05
NEK3P51956 RNU7-99P-201ENST00000516271 62 ntBASIC2.23□□□□□ -2.05
NEK3P51956 Y_RNA.721-201ENST00000517207 102 ntBASIC2.23□□□□□ -2.05
NEK3P51956 AP002001.1-203ENST00000534002 267 ntBASIC2.23□□□□□ -2.05
NEK3P51956 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.23□□□□□ -2.05
NEK3P51956 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.23□□□□□ -2.05
NEK3P51956 AC007485.1-201ENST00000616755 206 ntBASIC2.23□□□□□ -2.05
NEK3P51956 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.23□□□□□ -2.05
NEK3P51956 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
NEK3P51956 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
NEK3P51956 RNU6-454P-201ENST00000364292 107 ntBASIC2.22□□□□□ -2.05
NEK3P51956 RNU4-76P-201ENST00000364509 141 ntBASIC2.22□□□□□ -2.05
NEK3P51956 Y_RNA.813-201ENST00000364639 102 ntBASIC2.22□□□□□ -2.05
NEK3P51956 Y_RNA.424-201ENST00000384063 103 ntBASIC2.22□□□□□ -2.05
NEK3P51956 SNORA20B-201ENST00000384220 132 ntBASIC2.22□□□□□ -2.05
NEK3P51956 RNU6-474P-201ENST00000384243 107 ntBASIC2.22□□□□□ -2.05
NEK3P51956 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.22□□□□□ -2.05
NEK3P51956 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
NEK3P51956 U8.20-201ENST00000459445 131 ntBASIC2.22□□□□□ -2.05
NEK3P51956 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
NEK3P51956 SNORA44.1-201ENST00000517031 108 ntBASIC2.22□□□□□ -2.05
NEK3P51956 RNU2-12P-201ENST00000517216 168 ntBASIC2.22□□□□□ -2.05
NEK3P51956 IGKV3-31-201ENST00000523109 329 ntBASIC2.22□□□□□ -2.05
NEK3P51956 MIR4438-201ENST00000585271 93 ntBASIC2.22□□□□□ -2.05
NEK3P51956 AC004467.1-201ENST00000615678 330 ntBASIC2.22□□□□□ -2.05
NEK3P51956 AC009831.4-201ENST00000620744 325 ntBASIC2.22□□□□□ -2.05
NEK3P51956 SNORA27.1-201ENST00000362604 124 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNU6-626P-201ENST00000363354 107 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNU6-708P-201ENST00000384217 107 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNU6-950P-201ENST00000384651 107 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNA5SP467-201ENST00000391274 118 ntBASIC2.21□□□□□ -2.06
NEK3P51956 MIR873-201ENST00000401120 77 ntBASIC2.21□□□□□ -2.06
NEK3P51956 RNU2-7P-201ENST00000410794 178 ntBASIC2.21□□□□□ -2.06
NEK3P51956 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
NEK3P51956 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.21□□□□□ -2.06
NEK3P51956 RPS27P22-201ENST00000478056 241 ntBASIC2.21□□□□□ -2.06
NEK3P51956 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
NEK3P51956 SNORA31.17-201ENST00000516953 127 ntBASIC2.21□□□□□ -2.06
NEK3P51956 AC022616.4-201ENST00000522985 181 ntBASIC2.21□□□□□ -2.06
NEK3P51956 AC040926.1-201ENST00000530195 238 ntBASIC2.21□□□□□ -2.06
NEK3P51956 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.21□□□□□ -2.06
NEK3P51956 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
NEK3P51956 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NEK3P51956 ZNF72P-201ENST00000425869 1908 ntBASIC2.21□□□□□ -2.06
NEK3P51956 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
NEK3P51956 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
NEK3P51956 Y_RNA.361-201ENST00000365515 120 ntBASIC2.2□□□□□ -2.06
NEK3P51956 RNU6-20P-201ENST00000384106 107 ntBASIC2.2□□□□□ -2.06
NEK3P51956 Y_RNA.458-201ENST00000384240 102 ntBASIC2.2□□□□□ -2.06
NEK3P51956 AL355796.1-201ENST00000406706 323 ntBASIC2.2□□□□□ -2.06
NEK3P51956 RNU2-54P-201ENST00000410299 190 ntBASIC2.2□□□□□ -2.06
NEK3P51956 RNU5A-5P-201ENST00000411054 116 ntBASIC2.2□□□□□ -2.06
NEK3P51956 AL354751.2-201ENST00000415471 210 ntBASIC2.2□□□□□ -2.06
NEK3P51956 RPL36AP21-201ENST00000490372 323 ntBASIC2.2□□□□□ -2.06
NEK3P51956 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
NEK3P51956 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
NEK3P51956 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
NEK3P51956 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
NEK3P51956 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NEK3P51956 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
NEK3P51956 Y_RNA.439-201ENST00000384119 94 ntBASIC2.19□□□□□ -2.06
NEK3P51956 MIR562-201ENST00000384894 95 ntBASIC2.19□□□□□ -2.06
NEK3P51956 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
NEK3P51956 AL163540.1-201ENST00000485382 386 ntBASIC2.19□□□□□ -2.06
NEK3P51956 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
NEK3P51956 Y_RNA.701-201ENST00000516812 110 ntBASIC2.19□□□□□ -2.06
NEK3P51956 Y_RNA.711-201ENST00000516993 102 ntBASIC2.19□□□□□ -2.06
NEK3P51956 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.19□□□□□ -2.06
NEK3P51956 MIR4423-201ENST00000580922 80 ntBASIC2.19□□□□□ -2.06
NEK3P51956 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEK3P51956 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.18□□□□□ -2.06
NEK3P51956 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NEK3P51956 Y_RNA.31-201ENST00000362574 102 ntBASIC2.18□□□□□ -2.06
NEK3P51956 Y_RNA.148-201ENST00000363557 117 ntBASIC2.18□□□□□ -2.06
NEK3P51956 Y_RNA.551-201ENST00000384661 102 ntBASIC2.18□□□□□ -2.06
NEK3P51956 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
NEK3P51956 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
NEK3P51956 HMGN2P19-201ENST00000425149 265 ntBASIC2.18□□□□□ -2.06
NEK3P51956 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
NEK3P51956 AC097462.1-201ENST00000514125 324 ntBASIC2.18□□□□□ -2.06
NEK3P51956 RNA5SP20-201ENST00000515976 84 ntBASIC2.18□□□□□ -2.06
NEK3P51956 RNU7-128P-201ENST00000517247 62 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms