Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RNU6-457P-201ENST00000363999 107 ntBASIC1.77□□□□□ -2.13
RXRGP48443 RNU6-1145P-201ENST00000384246 107 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
RXRGP48443 PDCL2P1-201ENST00000419302 352 ntBASIC1.77□□□□□ -2.13
RXRGP48443 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MRPS10P1-201ENST00000448483 130 ntBASIC1.77□□□□□ -2.13
RXRGP48443 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
RXRGP48443 AC010469.2-201ENST00000496412 480 ntBASIC1.77□□□□□ -2.13
RXRGP48443 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
RXRGP48443 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.77□□□□□ -2.13
RXRGP48443 AC144568.1-201ENST00000520139 137 ntBASIC1.77□□□□□ -2.13
RXRGP48443 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.77□□□□□ -2.13
RXRGP48443 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.77□□□□□ -2.13
RXRGP48443 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.77□□□□□ -2.13
RXRGP48443 AC113139.1-201ENST00000605049 239 ntBASIC1.77□□□□□ -2.13
RXRGP48443 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MIR1244-1-201ENST00000612829 85 ntBASIC1.77□□□□□ -2.13
RXRGP48443 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.77□□□□□ -2.13
RXRGP48443 MIR1244-3-201ENST00000635744 85 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MIR1244-2-201ENST00000636449 85 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MIR1244-4-202ENST00000636813 85 ntBASIC1.77□□□□□ -2.13
RXRGP48443 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
RXRGP48443 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
RXRGP48443 RNU6-99P-201ENST00000364721 107 ntBASIC1.76□□□□□ -2.13
RXRGP48443 RNU6-1310P-201ENST00000384153 107 ntBASIC1.76□□□□□ -2.13
RXRGP48443 Y_RNA.577-201ENST00000384794 101 ntBASIC1.76□□□□□ -2.13
RXRGP48443 SNORA69.1-201ENST00000390904 137 ntBASIC1.76□□□□□ -2.13
RXRGP48443 MRPL42P3-201ENST00000401492 326 ntBASIC1.76□□□□□ -2.13
RXRGP48443 AL161935.2-201ENST00000414627 60 ntBASIC1.76□□□□□ -2.13
RXRGP48443 SUMO1P2-201ENST00000452524 304 ntBASIC1.76□□□□□ -2.13
RXRGP48443 Y_RNA.653-201ENST00000459091 95 ntBASIC1.76□□□□□ -2.13
RXRGP48443 RNU6-625P-201ENST00000459412 107 ntBASIC1.76□□□□□ -2.13
RXRGP48443 MTND4P17-201ENST00000470444 350 ntBASIC1.76□□□□□ -2.13
RXRGP48443 RPS26P55-201ENST00000471178 356 ntBASIC1.76□□□□□ -2.13
RXRGP48443 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.76□□□□□ -2.13
RXRGP48443 AL162424.1-201ENST00000602325 221 ntBASIC1.76□□□□□ -2.13
RXRGP48443 AL121890.5-201ENST00000620848 304 ntBASIC1.76□□□□□ -2.13
RXRGP48443 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
RXRGP48443 RNU6-1123P-201ENST00000362347 106 ntBASIC1.75□□□□□ -2.13
RXRGP48443 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
RXRGP48443 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
RXRGP48443 Y_RNA.384-201ENST00000383909 102 ntBASIC1.75□□□□□ -2.13
RXRGP48443 SNORA75.6-201ENST00000391318 127 ntBASIC1.75□□□□□ -2.13
RXRGP48443 AL034345.1-201ENST00000407768 123 ntBASIC1.75□□□□□ -2.13
RXRGP48443 RPS20P15-201ENST00000412792 311 ntBASIC1.75□□□□□ -2.13
RXRGP48443 AC004965.1-201ENST00000413033 213 ntBASIC1.75□□□□□ -2.13
RXRGP48443 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.75□□□□□ -2.13
RXRGP48443 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.75□□□□□ -2.13
RXRGP48443 RNU6-559P-201ENST00000516151 98 ntBASIC1.75□□□□□ -2.13
RXRGP48443 AC018448.1-201ENST00000552843 316 ntBASIC1.75□□□□□ -2.13
RXRGP48443 FRG2DP-202ENST00000566967 323 ntBASIC1.75□□□□□ -2.13
RXRGP48443 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
RXRGP48443 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.75□□□□□ -2.13
RXRGP48443 AC080078.3-201ENST00000605407 463 ntBASIC1.75□□□□□ -2.13
RXRGP48443 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.74□□□□□ -2.13
RXRGP48443 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
RXRGP48443 RNA5SP361-201ENST00000362686 118 ntBASIC1.74□□□□□ -2.13
RXRGP48443 SNORD1A-201ENST00000364968 72 ntBASIC1.74□□□□□ -2.13
RXRGP48443 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
RXRGP48443 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
RXRGP48443 MRPL35P1-201ENST00000404272 572 ntBASIC1.74□□□□□ -2.13
RXRGP48443 RNA5SP247-201ENST00000411181 105 ntBASIC1.74□□□□□ -2.13
RXRGP48443 AC138393.2-201ENST00000414742 246 ntBASIC1.74□□□□□ -2.13
RXRGP48443 MTCO3P19-201ENST00000415864 321 ntBASIC1.74□□□□□ -2.13
RXRGP48443 SNORA20.3-201ENST00000516880 132 ntBASIC1.74□□□□□ -2.13
RXRGP48443 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
RXRGP48443 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.74□□□□□ -2.13
RXRGP48443 AC023157.2-201ENST00000540596 141 ntBASIC1.74□□□□□ -2.13
RXRGP48443 AL929325.1-201ENST00000603096 117 ntBASIC1.74□□□□□ -2.13
RXRGP48443 SNORA28-201ENST00000606769 126 ntBASIC1.74□□□□□ -2.13
RXRGP48443 AC040896.1-201ENST00000613819 479 ntBASIC1.74□□□□□ -2.13
RXRGP48443 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RXRGP48443 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RXRGP48443 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
RXRGP48443 Y_RNA.164-201ENST00000363709 102 ntBASIC1.73□□□□□ -2.13
RXRGP48443 RNU6-1188P-201ENST00000363795 107 ntBASIC1.73□□□□□ -2.13
RXRGP48443 RNU6-1297P-201ENST00000384415 104 ntBASIC1.73□□□□□ -2.13
RXRGP48443 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
RXRGP48443 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
RXRGP48443 AC005002.2-201ENST00000438228 269 ntBASIC1.73□□□□□ -2.13
RXRGP48443 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.73□□□□□ -2.13
RXRGP48443 RPL30P15-201ENST00000457129 321 ntBASIC1.73□□□□□ -2.13
RXRGP48443 AC022493.2-201ENST00000506122 481 ntBASIC1.73□□□□□ -2.13
RXRGP48443 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.73□□□□□ -2.13
RXRGP48443 RNU6-1213P-201ENST00000517075 94 ntBASIC1.73□□□□□ -2.13
RXRGP48443 RNU7-172P-201ENST00000517125 64 ntBASIC1.73□□□□□ -2.13
RXRGP48443 SUB1P3-201ENST00000564581 315 ntBASIC1.73□□□□□ -2.13
RXRGP48443 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
RXRGP48443 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
RXRGP48443 MIR8054-201ENST00000620877 86 ntBASIC1.73□□□□□ -2.13
RXRGP48443 MIR3674-201ENST00000636576 68 ntBASIC1.73□□□□□ -2.13
RXRGP48443 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RXRGP48443 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RXRGP48443 AC018630.2-201ENST00000534866 2403 ntBASIC1.72□□□□□ -2.13
RXRGP48443 RNU6-874P-201ENST00000362390 105 ntBASIC1.72□□□□□ -2.13
RXRGP48443 RNU6-407P-201ENST00000365280 104 ntBASIC1.72□□□□□ -2.13
RXRGP48443 RNA5SP259-201ENST00000365541 109 ntBASIC1.72□□□□□ -2.13
RXRGP48443 RNU6-203P-201ENST00000384038 104 ntBASIC1.72□□□□□ -2.13
RXRGP48443 RNU6-1156P-201ENST00000410365 100 ntBASIC1.72□□□□□ -2.13
RXRGP48443 Y_RNA.605-201ENST00000410577 105 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms