Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 Y_RNA.164-201ENST00000363709 102 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 Y_RNA.314-201ENST00000365114 102 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-321P-201ENST00000410912 106 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-57P-201ENST00000411348 103 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AC060773.1-201ENST00000421698 310 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD4P46934 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD4P46934 U8.22-201ENST00000459141 133 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AK6P2-201ENST00000549020 471 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AC068338.1-201ENST00000565567 176 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
NEDD4P46934 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
NEDD4P46934 Y_RNA.252-201ENST00000364556 101 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 RNU6-318P-201ENST00000384283 103 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 Y_RNA.509-201ENST00000384506 99 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 TOMM22P2-201ENST00000430735 237 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 UQCRBP2-201ENST00000447827 297 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 AC105758.1-201ENST00000506038 399 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 MRPS17P9-201ENST00000511924 393 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 AC025647.1-201ENST00000517879 253 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 AL442163.3-201ENST00000554110 156 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD4P46934 MIR3684-201ENST00000579779 74 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 AC091925.1-201ENST00000623204 462 ntBASIC1.65□□□□□ -2.15
NEDD4P46934 RNU6-1115P-201ENST00000362490 106 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RNU6-1301P-201ENST00000362724 104 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 U8.1-201ENST00000362843 134 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 Y_RNA.197-201ENST00000364004 102 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 Y_RNA.226-201ENST00000364337 114 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RNU6-1240P-201ENST00000365155 104 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RNU1-115P-201ENST00000365329 160 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 SNORA8-201ENST00000384574 139 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 Y_RNA.579-201ENST00000390939 94 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 AC244636.1-201ENST00000421152 228 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 MRPS18CP6-201ENST00000423587 223 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 CST2P1-201ENST00000425770 87 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.64□□□□□ -2.15
NEDD4P46934 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.64□□□□□ -2.15
NEDD4P46934 RNU6-1041P-201ENST00000516254 102 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 RNU6-107P-201ENST00000516643 102 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.64□□□□□ -2.15
NEDD4P46934 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.64□□□□□ -2.15
NEDD4P46934 AC104985.2-201ENST00000620598 500 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
NEDD4P46934 MIR410-201ENST00000362222 80 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNA5SP361-201ENST00000362686 118 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNU6-1266P-201ENST00000362794 105 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNU6-1264P-201ENST00000383891 107 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNY3P4-201ENST00000384428 101 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 Y_RNA.498-201ENST00000384460 102 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 MIR515-2-201ENST00000384883 83 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 MIR515-1-201ENST00000384884 83 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 MIR1253-201ENST00000408273 105 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 SNORD12B-201ENST00000410433 91 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 MTCO3P19-201ENST00000415864 321 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.63□□□□□ -2.15
NEDD4P46934 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 AC023442.1-201ENST00000531247 422 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.63□□□□□ -2.15
NEDD4P46934 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 MIR4421-201ENST00000578133 69 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 VN1R91P-201ENST00000594377 169 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.63□□□□□ -2.15
NEDD4P46934 AL138825.1-201ENST00000618587 192 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 U2.1-201ENST00000618978 145 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 AC138305.3-201ENST00000624988 240 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 ZNF209P-201ENST00000593450 2304 ntBASIC1.63□□□□□ -2.15
NEDD4P46934 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
NEDD4P46934 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AC245060.5-201ENST00000610778 3293 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 snoU2-30.2-201ENST00000362805 70 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 Y_RNA.61-201ENST00000362835 102 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 RNU1-96P-201ENST00000364163 162 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 MIR628-201ENST00000385229 95 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AL117342.1-201ENST00000404861 406 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 ELOCP21-201ENST00000412558 336 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
NEDD4P46934 AC004223.1-201ENST00000479840 271 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 SNORA40.9-201ENST00000515895 93 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AC018448.1-201ENST00000552843 316 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.62□□□□□ -2.15
NEDD4P46934 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.62□□□□□ -2.15
NEDD4P46934 MIR4781-201ENST00000585250 76 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AL359821.1-201ENST00000605519 182 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 AC006001.4-201ENST00000622243 395 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 MIR338-201ENST00000636369 67 ntBASIC1.62□□□□□ -2.15
NEDD4P46934 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.61□□□□□ -2.15
NEDD4P46934 Y_RNA.5-201ENST00000362334 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms