Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF885P-201ENST00000420174 1098 ntBASIC0.92□□□□□ -2.26
SSR1P43307 AC243428.1-201ENST00000421099 264 ntBASIC0.92□□□□□ -2.26
SSR1P43307 DLGAP5P1-201ENST00000430307 464 ntBASIC0.92□□□□□ -2.26
SSR1P43307 MTND3P23-201ENST00000431980 347 ntBASIC0.92□□□□□ -2.26
SSR1P43307 AC104332.1-201ENST00000440471 797 ntBASIC0.92□□□□□ -2.26
SSR1P43307 MTCO2P7-201ENST00000446518 666 ntBASIC0.92□□□□□ -2.26
SSR1P43307 AC091021.1-201ENST00000468051 388 ntBASIC0.92□□□□□ -2.26
SSR1P43307 AC005840.1-201ENST00000498412 377 ntBASIC0.92□□□□□ -2.26
SSR1P43307 RNU6-1088P-201ENST00000516850 104 ntBASIC0.92□□□□□ -2.26
SSR1P43307 RNU6-1116P-201ENST00000517269 99 ntBASIC0.92□□□□□ -2.26
SSR1P43307 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.92□□□□□ -2.26
SSR1P43307 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
SSR1P43307 AL513423.1-201ENST00000621695 132 ntBASIC0.92□□□□□ -2.26
SSR1P43307 MIR6079-201ENST00000635807 62 ntBASIC0.92□□□□□ -2.26
SSR1P43307 Y_RNA.338-201ENST00000365320 114 ntBASIC0.91□□□□□ -2.26
SSR1P43307 SNORD116-11-201ENST00000383882 92 ntBASIC0.91□□□□□ -2.26
SSR1P43307 Y_RNA.414-201ENST00000384011 101 ntBASIC0.91□□□□□ -2.26
SSR1P43307 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.91□□□□□ -2.26
SSR1P43307 AC114482.1-201ENST00000418010 247 ntBASIC0.91□□□□□ -2.26
SSR1P43307 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
SSR1P43307 DAP3P1-201ENST00000441522 278 ntBASIC0.91□□□□□ -2.26
SSR1P43307 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.91□□□□□ -2.26
SSR1P43307 RNU6-1291P-201ENST00000516591 104 ntBASIC0.91□□□□□ -2.26
SSR1P43307 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.91□□□□□ -2.26
SSR1P43307 APOOP3-201ENST00000536787 586 ntBASIC0.91□□□□□ -2.26
SSR1P43307 AC004584.2-201ENST00000570407 410 ntBASIC0.91□□□□□ -2.26
SSR1P43307 MIR5696-201ENST00000578474 85 ntBASIC0.91□□□□□ -2.26
SSR1P43307 Y_RNA.265-201ENST00000364677 108 ntBASIC0.9□□□□□ -2.27
SSR1P43307 RNU6-392P-201ENST00000364926 101 ntBASIC0.9□□□□□ -2.27
SSR1P43307 SNORA20B-201ENST00000384220 132 ntBASIC0.9□□□□□ -2.27
SSR1P43307 SNORD116-2-201ENST00000384274 95 ntBASIC0.9□□□□□ -2.27
SSR1P43307 Y_RNA.559-201ENST00000384686 107 ntBASIC0.9□□□□□ -2.27
SSR1P43307 SNORD116-6-201ENST00000384711 96 ntBASIC0.9□□□□□ -2.27
SSR1P43307 RNU2-16P-201ENST00000410712 136 ntBASIC0.9□□□□□ -2.27
SSR1P43307 RNU6-1001P-201ENST00000411265 100 ntBASIC0.9□□□□□ -2.27
SSR1P43307 USP9YP30-201ENST00000430729 455 ntBASIC0.9□□□□□ -2.27
SSR1P43307 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
SSR1P43307 MTND1P29-201ENST00000448112 647 ntBASIC0.9□□□□□ -2.27
SSR1P43307 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.9□□□□□ -2.27
SSR1P43307 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.9□□□□□ -2.27
SSR1P43307 MIR4273-201ENST00000582824 84 ntBASIC0.9□□□□□ -2.27
SSR1P43307 GHRLOS.1-201ENST00000610995 70 ntBASIC0.9□□□□□ -2.27
SSR1P43307 AC010999.1-201ENST00000611856 324 ntBASIC0.9□□□□□ -2.27
SSR1P43307 AL357075.2-201ENST00000614906 189 ntBASIC0.9□□□□□ -2.27
SSR1P43307 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SSR1P43307 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
SSR1P43307 RNU6-199P-201ENST00000362954 107 ntBASIC0.89□□□□□ -2.27
SSR1P43307 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
SSR1P43307 RNU6-407P-201ENST00000365280 104 ntBASIC0.89□□□□□ -2.27
SSR1P43307 Y_RNA.530-201ENST00000384587 101 ntBASIC0.89□□□□□ -2.27
SSR1P43307 RNU6-136P-201ENST00000384663 107 ntBASIC0.89□□□□□ -2.27
SSR1P43307 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
SSR1P43307 MIR605-201ENST00000385078 83 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AC245047.7-201ENST00000440265 293 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.89□□□□□ -2.27
SSR1P43307 RPS26P48-201ENST00000491713 339 ntBASIC0.89□□□□□ -2.27
SSR1P43307 OR9P1P-201ENST00000496431 281 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AC097462.1-201ENST00000514125 324 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AC093303.1-201ENST00000514549 295 ntBASIC0.89□□□□□ -2.27
SSR1P43307 RNU7-172P-201ENST00000517125 64 ntBASIC0.89□□□□□ -2.27
SSR1P43307 MIR4498-201ENST00000577599 66 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AL117336.2-201ENST00000602435 335 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AL513534.2-201ENST00000603836 250 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AC100810.6-201ENST00000638068 285 ntBASIC0.89□□□□□ -2.27
SSR1P43307 AC023934.1-201ENST00000574529 2389 ntBASIC0.89□□□□□ -2.27
SSR1P43307 Y_RNA.106-201ENST00000363189 100 ntBASIC0.88□□□□□ -2.27
SSR1P43307 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.88□□□□□ -2.27
SSR1P43307 RNU6-842P-201ENST00000384269 107 ntBASIC0.88□□□□□ -2.27
SSR1P43307 RNU6-424P-201ENST00000384367 105 ntBASIC0.88□□□□□ -2.27
SSR1P43307 Y_RNA.517-201ENST00000384551 106 ntBASIC0.88□□□□□ -2.27
SSR1P43307 NDUFB4P10-201ENST00000452541 359 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.88□□□□□ -2.27
SSR1P43307 RNU6-1198P-201ENST00000516904 67 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.88□□□□□ -2.27
SSR1P43307 AC134698.4-201ENST00000523451 826 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
SSR1P43307 AC093023.1-201ENST00000547375 507 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AC245505.1-201ENST00000556398 224 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AC106800.4-201ENST00000614905 153 ntBASIC0.88□□□□□ -2.27
SSR1P43307 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.88□□□□□ -2.27
SSR1P43307 MIR1321-201ENST00000637766 79 ntBASIC0.88□□□□□ -2.27
SSR1P43307 SNORA1B-201ENST00000362535 133 ntBASIC0.87□□□□□ -2.27
SSR1P43307 RNA5SP361-201ENST00000362686 118 ntBASIC0.87□□□□□ -2.27
SSR1P43307 RNU6-280P-201ENST00000364145 104 ntBASIC0.87□□□□□ -2.27
SSR1P43307 RNU6-281P-201ENST00000384212 103 ntBASIC0.87□□□□□ -2.27
SSR1P43307 Y_RNA.554-201ENST00000384672 102 ntBASIC0.87□□□□□ -2.27
SSR1P43307 AC063976.4-201ENST00000421971 163 ntBASIC0.87□□□□□ -2.27
SSR1P43307 snoU13.25-201ENST00000458945 104 ntBASIC0.87□□□□□ -2.27
SSR1P43307 RNU7-175P-201ENST00000515915 61 ntBASIC0.87□□□□□ -2.27
SSR1P43307 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
SSR1P43307 AL590705.4-201ENST00000532209 134 ntBASIC0.87□□□□□ -2.27
SSR1P43307 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.87□□□□□ -2.27
SSR1P43307 AC125232.2-201ENST00000592457 143 ntBASIC0.87□□□□□ -2.27
SSR1P43307 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
SSR1P43307 AC245008.1-201ENST00000608123 476 ntBASIC0.87□□□□□ -2.27
SSR1P43307 MIR6128-201ENST00000615528 109 ntBASIC0.87□□□□□ -2.27
SSR1P43307 MTND5P16-201ENST00000460269 1703 ntBASIC0.86□□□□□ -2.27
SSR1P43307 RNU6-969P-201ENST00000383900 105 ntBASIC0.86□□□□□ -2.27
SSR1P43307 RNU6-831P-201ENST00000384548 107 ntBASIC0.86□□□□□ -2.27
SSR1P43307 AC018865.2-201ENST00000423631 129 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms